DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and Ube2d1

DIOPT Version :10

Sequence 1:NP_524230.2 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001408209.1 Gene:Ube2d1 / 216080 MGIID:2384911 Length:186 Species:Mus musculus


Alignment Length:135 Identity:57/135 - (42%)
Similarity:85/135 - (62%) Gaps:0/135 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRF 72
            |..::...||.|||...|..|..:::..|.|.|.||.|:.::.|.|.||:.|..:||.|||.:.|
Mouse    44 RPAQELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAF 108

  Fly    73 VSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREY 137
            .:|::|||:.::|.||||||:::|||...||.:|.||.|||.||||:.|.....||:||.::.:|
Mouse   109 TTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKY 173

  Fly   138 EKRVK 142
            .:..:
Mouse   174 NRHAR 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_524230.2 UBCc_UBE2A_2B 3..145 CDD:467410 57/135 (42%)
Ube2d1NP_001408209.1 UBCc_UBE2D 44..184 CDD:467412 57/135 (42%)

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