DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and ubc-24

DIOPT Version :9

Sequence 1:NP_001246916.1 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_495769.2 Gene:ubc-24 / 186057 WormBaseID:WBGene00006719 Length:160 Species:Caenorhabditis elegans


Alignment Length:145 Identity:42/145 - (28%)
Similarity:68/145 - (46%) Gaps:32/145 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGT------FKLTIEFTEEYP 64
            :||.::||:::::...             |:...|.|       ||.      |.||::...|||
 Worm    29 KRRFIKDFRKIEKCKD-------------IFQFKIIG-------DGVLYKNMIFTLTLDVNVEYP 73

  Fly    65 NKPPTVRFVSKVFHPNVYADGGIC----LDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANST 125
            .|||.::|...|:||||  |...|    ..:||..|.|...:..:|.::..||::|:.:.|.|..
 Worm    74 FKPPYLKFCHNVYHPNV--DPVTCELCSPMLLQENWKPETTMEDVLLNLIVLLNEPDLSRPVNID 136

  Fly   126 AAQLYKENRREYEKR 140
            ||..|..|:.|:.|:
 Worm   137 AAHDYIHNKVEFVKK 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:395127 41/143 (29%)
ubc-24NP_495769.2 UBCc 17..160 CDD:214562 42/145 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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