DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and ubc-17

DIOPT Version :9

Sequence 1:NP_001246916.1 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_509188.3 Gene:ubc-17 / 181979 WormBaseID:WBGene00006712 Length:728 Species:Caenorhabditis elegans


Alignment Length:165 Identity:46/165 - (27%)
Similarity:76/165 - (46%) Gaps:24/165 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RRLMRDFKRLQEDPPTGVSGA----PTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKP 67
            :|:.::...:....|...|.:    ..:..:.|...:|.||.|||:.:|.|:..|.|...||..|
 Worm   405 KRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYPFSP 469

  Fly    68 PTVRFVSK-----VFHPNVYADGGICLDIL-------QNRWSPTYDVSAILTSIQSLL--SDPNP 118
            |...|::.     .|:||:|.||.|||.||       :.:|:|...:..:|.|||.|:  .||..
 Worm   470 PKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCSLMQVLVSIQGLIFVKDPYF 534

  Fly   119 NSPANSTAAQLYKENRR--EYEKRVKACVEQSFID 151
            |.|    ..:.|:...|  ||.::....:|.:.::
 Worm   535 NEP----GFERYQGTDRGDEYSRKYNLQIEHATLN 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_001246916.1 UQ_con 8..145 CDD:395127 45/156 (29%)
ubc-17NP_509188.3 UBCc 406..>527 CDD:214562 36/120 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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