DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc6 and UBE2F

DIOPT Version :10

Sequence 1:NP_524230.2 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_542409.1 Gene:UBE2F / 140739 HGNCID:12480 Length:185 Species:Homo sapiens


Alignment Length:155 Identity:40/155 - (25%)
Similarity:73/155 - (47%) Gaps:17/155 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STPARRRLMRDFKRLQED--------PPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIE 58
            |...||..:|| |.|.::        |.|.....|..|.:..:...: .|.:..::.|.|:...|
Human    24 SDSTRRVSVRD-KLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETE 86

  Fly    59 FTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNR------WSPTYDVSAILTSIQSLLSD-P 116
            ..:.|...||.|:.::|::|||:...|.|||.:|:..      |:||..:..::..:.||.:| .
Human    87 VPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLL 151

  Fly   117 NPNSPANSTAAQLYKENRREYEKRV 141
            |.:.|.|..||:.:..::.::..:|
Human   152 NFDDPLNIEAAEHHLRDKEDFRNKV 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc6NP_524230.2 UBCc_UBE2A_2B 3..145 CDD:467410 39/154 (25%)
UBE2FNP_542409.1 Interaction with UBA3. /evidence=ECO:0000269|PubMed:19250909 1..29 1/4 (25%)
UBCc_UBE2F_UBE2M 32..176 CDD:467414 36/145 (25%)

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