DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdep and Fgd5

DIOPT Version :9

Sequence 1:NP_001097685.2 Gene:Cdep / 40608 FlyBaseID:FBgn0265082 Length:4273 Species:Drosophila melanogaster
Sequence 2:NP_001102107.2 Gene:Fgd5 / 362402 RGDID:1305589 Length:1520 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdepNP_001097685.2 B41 70..264 CDD:214604
FERM_N 73..134 CDD:286467
FERM_B-lobe 163..256 CDD:271216
FERM_C_FARP1-like 251..372 CDD:270014
FA 364..406 CDD:285894
Fgd5NP_001102107.2 PHA03169 113..>324 CDD:223003
RhoGEF 951..1139 CDD:366202
PH-like 1158..1280 CDD:388408
FYVE_like_SF 1294..1360 CDD:333710
PH2_FGD5_FGD6 1424..1514 CDD:270057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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