DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdep and MYLIP

DIOPT Version :10

Sequence 1:NP_001097685.2 Gene:Cdep / 40608 FlyBaseID:FBgn0265082 Length:4273 Species:Drosophila melanogaster
Sequence 2:NP_037394.2 Gene:MYLIP / 29116 HGNCID:21155 Length:445 Species:Homo sapiens


Alignment Length:370 Identity:94/370 - (25%)
Similarity:168/370 - (45%) Gaps:51/370 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 DSITM-FQVQAKALGRVLFEQVCRQLNLLEADYFGLEYQEVSTHTKYWLDLEKPMNRQV-GLSLI 140
            |::.| .:|:|||.|.....||||:|.::|.|||||::.. |.....||:|...:::|: ||:  
Human     9 DAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTG-SKGESLWLNLRNRISQQMDGLA-- 70

  Fly   141 DPV-LRFCIKFYTPDPAQLEEEYTRYLFCLQIKRDLATGSLQCNDNTAALMASYIVQASCGDFVP 204
             |. |:..:||:. :|..:.:|.||::|.|.||..|..|.|.|:...|..:::.:.|...|    
Human    71 -PYRLKLRVKFFV-EPHLILQEQTRHIFFLHIKEALLAGHLLCSPEQAVELSALLAQTKFG---- 129

  Fly   205 EDYPDHTYLSSYRFVPNQD---ATMQRKIMENHKKHVGQSPAEADLNLLETARRCELYGMKMHPA 266
             ||..:|...:|..:..::   ||: ..|:..||:..|.|.|.|:..:|:.....|.||::.|..
Human   130 -DYNQNTAKYNYEELCAKELSSATL-NSIVAKHKELEGTSQASAEYQVLQIVSAMENYGIEWHSV 192

  Fly   267 KDVEGVPLNLAVAHMGITVFQ-NITRINTFSWAKIRKISFKRKRFLVKLHPEGYGYYKDTVEFFF 330
            :|.||..|.:.|...||::.: :.:.||..::..::..:...|...:.:..|.    .:::...|
Human   193 RDSEGQKLLIGVGPEGISICKDDFSPINRIAYPVVQMATQSGKNVYLTVTKES----GNSIVLLF 253

  Fly   331 E--GRNECKNFWKKCVENHGFFRCTAVQNTPRRK--------------TRVLSRGSSFRYSGK-T 378
            :  ........::...|.|.|:||..|.:....:              ...::.|..:.:..| |
Human   254 KMISTRAASGLYRAITETHAFYRCDTVTSAVMMQYSRDLKGHLASLFLNENINLGKKYVFDIKRT 318

  Fly   379 QKQIIEFVRE--------NYVKRQNFQRSQSFRQGPLNASSRSQS 415
            .|::.:..|.        :.|.|.|    ||....||.:|..|.:
Human   319 SKEVYDHARRALYNAGVVDLVSRNN----QSPSHSPLKSSESSMN 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdepNP_001097685.2 B41 70..264 CDD:214604 61/191 (32%)
FERM_C_FARP1-like 251..372 CDD:270014 23/137 (17%)
FA 364..404 CDD:462582 10/48 (21%)
GAPT <1240..1299 CDD:463345
PTZ00121 <2219..2716 CDD:173412
MYLIPNP_037394.2 FERM_F1_MYLIP 1..81 CDD:340624 28/75 (37%)
B41 5..190 CDD:214604 61/191 (32%)
FERM_C_MYLIP_IDOL 185..295 CDD:270016 21/113 (19%)
RING-HC_MYLIP 383..434 CDD:438186
Critical for homodimerization 431..433
Blue background indicates that the domain is not in the aligned region.

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