DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdep and Frmd5

DIOPT Version :10

Sequence 1:NP_001097685.2 Gene:Cdep / 40608 FlyBaseID:FBgn0265082 Length:4273 Species:Drosophila melanogaster
Sequence 2:XP_011237768.1 Gene:Frmd5 / 228564 MGIID:2442557 Length:599 Species:Mus musculus


Alignment Length:656 Identity:177/656 - (26%)
Similarity:269/656 - (41%) Gaps:184/656 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 KKLTVRIQMLDDSITMFQVQAKALGRVLFEQVCRQLNLLEADYFGLEYQEVSTHTKYWLDLEKPM 131
            ::.:..:::||||.....:|..|.|:.||:.:|..|||||.||||:.:.:.... ::||:..|.:
Mouse    15 REYSCTVRLLDDSEYTCTIQRDAKGQYLFDLLCHHLNLLEKDYFGIRFVDPDKQ-RHWLEFTKSV 78

  Fly   132 NRQVGLSLIDPVLRFC--IKFYTPDPAQLEEEYTRYLFCLQIKRDLATGSLQCNDNTAALMASYI 194
            .:|:   ...|....|  :|||..|||.|:||.||||..|||||||..|.|.|..:.|||:|:||
Mouse    79 VKQL---RSQPPFTMCFRVKFYPADPAALKEEITRYLVFLQIKRDLYHGRLLCKTSDAALLAAYI 140

  Fly   195 VQASCGDFVPEDYPDHTYLSSYRFVPNQDATMQRKIMENHKKHV-GQSPAEADLNLLETARRCEL 258
            :||..||:.|..:|: .|.|.::|.|.....:::||.|.||..: ||:||.::||.|..|:..|.
Mouse   141 LQAEIGDYDPGKHPE-GYSSKFQFFPKHSEKLEKKIAEIHKTELSGQTPATSELNFLRKAQTLET 204

  Fly   259 YGMKMHPAKDVEGVPLNLAVAHMGITVFQNITRIN-----------------------------T 294
            ||:..||.|||.|....||....|..|.|...|::                             .
Mouse   205 YGVDPHPCKDVSGNAAFLAFTPFGFVVLQGNKRVHFIKCILFASFTAAIHWAGGFKDFSTITPKP 269

  Fly   295 FSWAKIRKISFKRKRFLVKLHPEGYGYYKDTVE------FFFEGRNECKNFWKKCVENHGFFRCT 353
            .||.::.|:.|:.|.|        |.|.....|      :|......||:.||..:||..|::  
Mouse   270 LSWNEVTKLKFEGKTF--------YLYVSQKEEKKIILTYFAPTPEACKHLWKCGIENQAFYK-- 324

  Fly   354 AVQNTPRRKT----RVLSRGSSFRYSGKTQKQIIEFVRENYVKRQNFQRSQSFRQGPLNASSRSQ 414
             ::.:.:.:|    .:..:||.|||||:..|:::|...:  :||   :..:..|.|.:  .||| 
Mouse   325 -LEKSSQVRTVSSSNLFFKGSRFRYSGRVAKEVMESSAK--IKR---EPPEIHRAGMV--PSRS- 380

  Fly   415 SHTYVNSSISANPLLPIDTAAWDYRNQCSDSMTPSLTKKAADTLDRRRDNPIGHMRSQVTAAQVE 479
                 ..||:..|.|               |..|...::|.                        
Mouse   381 -----CPSITHGPRL---------------SSVPRTRRRAV------------------------ 401

  Fly   480 IYQTKNYAADSPTSQEEAECSAAGAERQHHSAVAMDKLNSNRSLSPQGPQSWTSPSHSSHHQQRG 544
                                         |.:: |:.|.|.|.      .:.::|..||.|    
Mouse   402 -----------------------------HISI-MEGLESLRD------SAHSTPVRSSSH---- 426

  Fly   545 PDPARVHPGDHNTGLSHLSHLYSSSTPRRVSVGSQAFVPASPQLISINTPSSSTNHNTMHSTSTV 609
                    ||  |.|.|:....:.|..|...:..:|:.||...|   .||.:.      ||...:
Mouse   427 --------GD--TFLPHVRSSRADSNERVAVIADEAYSPADSVL---PTPVAE------HSLELM 472

  Fly   610 VRSVDLN-SSMELEEEAEDPGTADTEEEEGEPVGEE----------EEEELVEEEVDSDLTASTI 663
            :.|..:| ::..:|||.|...:..| ..|.|.:|.|          .|:|.|.:.|.|.|....:
Mouse   473 LLSRQINGATCSIEEEKESEASTPT-ATEAEALGGELRALCQGHGGSEQEQVNKFVLSVLRLLLV 536

  Fly   664 NRETMG 669
               |||
Mouse   537 ---TMG 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdepNP_001097685.2 B41 70..264 CDD:214604 80/196 (41%)
FERM_C_FARP1-like 251..372 CDD:270014 36/159 (23%)
FA 364..404 CDD:462582 11/39 (28%)
GAPT <1240..1299 CDD:463345
PTZ00121 <2219..2716 CDD:173412
Frmd5XP_011237768.1 B41 19..210 CDD:214604 80/195 (41%)
PH-like 191..324 CDD:473070 36/140 (26%)
FA 338..383 CDD:462582 16/57 (28%)
Blue background indicates that the domain is not in the aligned region.

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