DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdep and FARP1

DIOPT Version :9

Sequence 1:NP_001097685.2 Gene:Cdep / 40608 FlyBaseID:FBgn0265082 Length:4273 Species:Drosophila melanogaster
Sequence 2:NP_001273768.1 Gene:FARP1 / 10160 HGNCID:3591 Length:1076 Species:Homo sapiens


Alignment Length:1244 Identity:356/1244 - (28%)
Similarity:527/1244 - (42%) Gaps:338/1244 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PGGRM----THSLSTPSGVDGTPSTPRHRGGKKLTVRIQMLDDSITMFQVQAKALGRVLFEQVCR 100
            ||.|:    ...:||.......|.||   .||.::::||||||:...|:|..:|.|:||.:.||.
Human    10 PGSRLGAPENSGISTLERGQKPPPTP---SGKLVSIKIQMLDDTQEAFEVPQRAPGKVLLDAVCN 71

  Fly   101 QLNLLEADYFGLEYQEVSTHTK--YWLDLEKPMNRQVGLSLIDP---VLRFCIKFYTPDPAQLEE 160
            .|||:|.||||||:.:   |.|  .||||.||:.:|:.    .|   |::|.:||:.||..||:|
Human    72 HLNLVEGDYFGLEFPD---HKKITVWLDLLKPIVKQIR----RPKHVVVKFVVKFFPPDHTQLQE 129

  Fly   161 EYTRYLFCLQIKRDLATGSLQCNDNTAALMASYIVQASCGDFVPEDYPDHTYLSSYRFVPNQDAT 225
            |.|||||.||:|:|||.|.|.|||.:|||:.|:|||:..|||  ::..|..:|:..:::|.||| 
Human   130 ELTRYLFALQVKQDLAQGRLTCNDTSAALLISHIVQSEIGDF--DEALDREHLAKNKYIPQQDA- 191

  Fly   226 MQRKIMENHKKHVGQSPAEADLNLLETARRCELYGMKMHPAKDVEGVPLNLAVAHMGITVFQNIT 290
            ::.||:|.|..|:||:|||:|..|||.|||.|:||:::|||||.||..:|||||:.||.|||..|
Human   192 LEDKIVEFHHNHIGQTPAESDFQLLEIARRLEMYGIRLHPAKDREGTKINLAVANTGILVFQGFT 256

  Fly   291 RINTFSWAKIRKISFKRKRFLVKLHPEGYGYYKDTVEFFFEGRNECKNFWKKCVENHGFFRCTAV 355
            :||.|:|||:||:||||||||:||.|:....|:||:||....|:.||:|||.|||:|.|||... 
Human   257 KINAFNWAKVRKLSFKRKRFLIKLRPDANSAYQDTLEFLMASRDFCKSFWKICVEHHAFFRLFE- 320

  Fly   356 QNTPRRKTRVLSRGSSFRYSGKTQKQIIEFVRENYVKRQNFQRSQSFRQGPLNASSRSQSHTYVN 420
            :..|:.|..:.|||||||:||:||||::::|:|...|:..|:|..|...   :..|.:...|.:|
Human   321 EPKPKPKPVLFSRGSSFRFSGRTQKQVLDYVKEGGHKKVQFERKHSKIH---SIRSLASQPTELN 382

  Fly   421 SSISANPLLPIDTAAWDYRNQCSDSMTPSLTKKAADTLDRRRDNPIGHMRSQVTAAQVEIYQTKN 485
            |.:..             ::|.|.|:          |.....::|.|....:....:|...:..:
Human   383 SEVLE-------------QSQQSTSL----------TFGEGAESPGGQSCRRGKEPKVSAGEPGS 424

  Fly   486 YAAD----SPTSQEEAECSAAGAERQHHSAVAMDKLNSNRSLSPQGPQSWTSPSHSSHHQQRGPD 546
            :.:.    ||...::|: .||.|..:....|..|:...::   ||.||    ||..|        
Human   425 HPSPAPRRSPAGNKQAD-GAASAPTEEEEEVVKDRTQQSK---PQPPQ----PSTGS-------- 473

  Fly   547 PARVHPGDHNTGLSHLSHLYSSSTPRRVSVGSQAFV-PASPQLISINTPSSSTNHNTMHSTSTVV 610
                     .||..|||.|         ||.||..| ||:..|      |.:.:.:|..::..: 
Human   474 ---------LTGSPHLSEL---------SVNSQGGVAPANVTL------SPNLSPDTKQASPLI- 513

  Fly   611 RSVDLNSSMELEEEAEDPGTADTEEEEG--------------EPVGEEEEEELVEEEVDSDLTAS 661
                   |..|.::| .|.|.|  |:||              :.|...|...|.:.||.:....|
Human   514 -------SPLLNDQA-CPRTDD--EDEGRRKRFPTDKAYFIAKEVSTTERTYLKDLEVITSWFQS 568

  Fly   662 TINRETMGAASAAAASASALGSGLASAHRPQLRSQESQSLTATPVHYSSTNYSMSKQCML----N 722
            |:::|            .|:...|.|...|...          |:|...||:....:..|    .
Human   569 TVSKE------------DAMPEALKSLIFPNFE----------PLHKFHTNFLKEIEQRLALWEG 611

  Fly   723 NANANSTETE-TDNIIYTDINDMGHYKYPDFHSSAHQEHKISNSEHLNLNERNDIYATVNRKAKS 786
            .:||...:.: ..:::..:|..|.|.          ..|...:||.|...| |.|        ||
Human   612 RSNAQIRDYQRIGDVMLKNIQGMKHL----------AAHLWKHSEALEALE-NGI--------KS 657

  Fly   787 KIREKHFSDEFIDQSI--------LQYTRAKQMGLSQVPVLLQQPSTSAYA------AALQE--- 834
            ..|.::|..:|..|.:        |.....:.|...||...|.:....::|      |||.|   
Human   658 SRRLENFCRDFELQKVCYLPLNTFLLRPLHRLMHYKQVLERLCKHHPPSHADFRDCRAALAEITE 722

  Fly   835 -------RSYNSGSYQYHNDLNH----------PSESSSSSYFGTGFGTKRYGQSERTKLAQSEN 882
                   ......::|..::|..          |....|.|.    ..|...||:.|...|....
Human   723 MVAQLHGTMIKMENFQKLHELKKDLIGIDNLVVPGRPGSFSL----IRTPHLGQARRIPCAPERR 783

  Fly   883 YLTPSLDSQSSRHTHSLPRNSELSG----------VDSVDSYDSHYITHHSVGILPPGHLSSSSE 937
               |.|..:......||   |:|||          .:.|..|.|..:|            :|:..
Human   784 ---PLLLVKEFIRLGSL---SKLSGKGLQQRMFFLFNDVLLYTSRGLT------------ASNQF 830

  Fly   938 KLDFQLPSGNLYSTTQFVKPEDASAHYMEDEEEEEEDE----------GEN------IYDQVERD 986
            |:..|||   ||..|                .||.|||          |:.      ...:.|.:
Human   831 KVHGQLP---LYGMT----------------IEESEDEWGVPHCLTLRGQRQSIIVAASSRSEME 876

  Fly   987 SWLKS-SSCKDLFERYSSTYYDREHSKPMTAFDKEFLSS----NRIDSPVTRYDDSRHSLYVAKN 1046
            .|::. ....||.|:.||.             ..|||:|    |:.....|..|........|..
Human   877 KWVEDIQMAIDLAEKSSSP-------------APEFLASSPPDNKSPDEATAADQESEDDLSASR 928

  Fly  1047 HSID---AHQGFSPLPQSKVYSSSYPGSTYNTQEHKRQHGH----HMDYSGSQDDISQDSYELLE 1104
            .|::   .|:|                   ||..|...|.:    .:|:|.:.:  :|.|..||.
Human   929 TSLERQAPHRG-------------------NTMVHVCWHRNTSVSMVDFSIAVE--NQLSGNLLR 972

  Fly  1105 KY--------------DIDFFGGRGRSEDHMRSCSLDSGNY---IPSDDESVSEGH------QQH 1146
            |:              :...|..:...::|..: ||....|   |||:.|::.:.:      :.|
Human   973 KFKNSNGWQKLWVVFTNFCLFFYKSHQDNHPLA-SLPLLGYSLTIPSESENIQKDYVFKLHFKSH 1036

  Fly  1147 KY--RSEMD 1153
            .|  |:|.:
Human  1037 VYYFRAESE 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CdepNP_001097685.2 B41 70..264 CDD:214604 96/198 (48%)
FERM_N 73..134 CDD:286467 32/62 (52%)
FERM_B-lobe 163..256 CDD:271216 48/92 (52%)
FERM_C_FARP1-like 251..372 CDD:270014 68/120 (57%)
FA 364..406 CDD:285894 19/41 (46%)
FARP1NP_001273768.1 B41 42..230 CDD:214604 96/197 (49%)
FERM_N 44..107 CDD:286467 33/69 (48%)
FERM_M 127..230 CDD:278785 55/105 (52%)
FERM_C_FARP1-like 217..337 CDD:270014 68/120 (57%)
FA 329..370 CDD:285894 19/43 (44%)
RhoGEF 542..728 CDD:238091 45/226 (20%)
PH1_FARP1-like 789..892 CDD:269928 29/136 (21%)
PH 792..886 CDD:278594 26/127 (20%)
PH2_FARP1-like 962..1059 CDD:270055 18/87 (21%)
PH 967..1060 CDD:278594 17/80 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 125 1.000 Domainoid score I5483
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm41275
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45858
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5540
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
55.040

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