DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gnf1 and ATAD5

DIOPT Version :9

Sequence 1:NP_001014605.1 Gene:Gnf1 / 40607 FlyBaseID:FBgn0004913 Length:1008 Species:Drosophila melanogaster
Sequence 2:XP_011523571.1 Gene:ATAD5 / 79915 HGNCID:25752 Length:1845 Species:Homo sapiens


Alignment Length:1245 Identity:237/1245 - (19%)
Similarity:398/1245 - (31%) Gaps:482/1245 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPETKKRKASKTASSEDDVVAATPEPIAKKARNGQKPALSKLKRHVDPTELFGGETKRVIVPKPK 113
            |.:..|...||..|....:..:||:...:..|                           |...|.
Human   568 PVKDIKLTQSKAESEASLLNVSTPKSTRRSGR---------------------------ISSTPT 605

  Fly   114 TKAVLEFENEDI-DRSLMEVDLDESIKEAAPEKKVHSITRS--------SPSPKRAK---NSSPE 166
            |:.:...:::|: |.|    .|..|.::||...:.||:..:        |.||.|.|   .|:|:
Human   606 TETIRGIDSDDVQDNS----QLKASTQKAANLSEKHSLYTAELITVPFDSESPIRMKFTRISTPK 666

  Fly   167 PPKPKST----KSKAT----TPRVKK---------------EK-PAADLESSVLTDE-------- 199
            ..|.||.    ||:||    |.:::|               || .|..:..|.:|:|        
Human   667 KSKKKSNKRSEKSEATDGGFTSQIRKASNTSKNISKAKQLIEKAKALHISRSKVTEEIAIPLRRS 731

  Fly   200 ERH----ERKRAS----AVLY-----------QKYKNRSSCLN--------------PG------ 225
            .||    |||:.|    :|:.           :|.:.:..|||              ||      
Human   732 SRHQTLPERKKLSETEDSVIIIDSSPTALKHPEKNQKKLQCLNDVLGKKLNTSTKNVPGKMKVAP 796

  Fly   226 --------------------SKEIPKGSPD----CLSGLTFVVTGVLESMEREEAESVIKEYGGK 266
                                |::..:.|.|    |.:...|:::|:.:.::|:.|:   |.....
Human   797 LFLVRKAQKAADPVPSFDESSQDTSEKSQDCDVQCKAKRDFLMSGLPDLLKRQIAK---KAAALD 858

  Fly   267 VMTVVGKKLKYLVVGEEAG---------PKK---LAVAEELNIPI--LSEDGLFDLIREKSGIAK 317
            |...|....:.:|..::..         |..   |...:|||..:  ||:.|:  .:.|.|.:..
Human   859 VYNAVSTSFQRVVHVQQKDDGCCLWHLKPPSCPLLTKFKELNTKVIDLSKCGI--ALGEFSTLNS 921

  Fly   318 QVKEEKKS-----PKKEHSSEEKG--KKEVKTSRRSSDKKEKEATKLKYGEKHDI------AKHK 369
            ::|....:     .:||.:.|.:.  .:|::.|......|:.....||...:|.:      :|..
Human   922 KLKSGNSAAVFMRTRKEFTEEVRNLLLEEIRWSNPEFSLKKYFPLLLKKQIEHQVLSSECHSKQA 986

  Fly   370 VKEEHTSPKETKDKLNDVPAVTLKVKK--------EPSSQKEHPPSPR----------TADLKTL 416
            ..|...|.||||.||.:......|.||        |.:::|....|.|          :.|..|.
Human   987 ELEADVSHKETKRKLVEAENSKSKRKKPNEYSKNLEKTNRKSEELSKRNNSSGIKLDSSKDSGTE 1051

  Fly   417 DVVGMAWVDKHKPTSIKEIVGQAGAASNVTNHNLKLKAKQERVKVLHYFNFPRLMNWLSKW---- 477
            |   |.|.:|::|.:..|::|...|                 :|.||        :||..|    
Human  1052 D---MLWTEKYQPQTASELIGNELA-----------------IKKLH--------SWLKDWKRRA 1088

  Fly   478 YVNHDGNKKPQRPNPWAKNDD---GSFYKAA-------------LLSGPPGIGKTTTATLVVKEL 526
            .:....|.|.:|..   |::|   |..:|.:             |::||.|:|||.......:||
Human  1089 ELEERQNLKGKRDE---KHEDFSGGIDFKGSSDDEEESRLCNTVLITGPTGVGKTAAVYACAQEL 1150

  Fly   527 GFDAVEFNASDTRS--------------------------------------------------- 540
            ||...|.|||..||                                                   
Human  1151 GFKIFEVNASSQRSGRQILSQLKEATQSHQVDKQGVNSQKPCFFNSYYIGKSPKKISSPKKVVTS 1215

  Fly   541 --------------KRLL-----------------KDEVSTLL-SNKSLSGYFTGQ--------- 564
                          ||.|                 .:|:..|| :||.:...|..:         
Human  1216 PRKVPPPSPKSSGPKRALPPKTLANYFKVSPKPKNNEEIGMLLENNKGIKNSFEQKQITQTKSTN 1280

  Fly   565 ----------GQAVSRKH---VLIMDEVDGMAGNEDRGGMQELIALIKDSSIPIICMCNDRNHPK 616
                      .:..|||:   :::.:||| :..:||.|.:..:...:..:..|:|...:|   |.
Human  1281 ATNSNVKDVGAEEPSRKNATSLILFEEVD-VIFDEDAGFLNAIKTFMATTKRPVILTTSD---PT 1341

  Fly   617 IRSLVNYCY-DLRFQRPRLEQIKGKIMSICFKEKVKISPAKVEEIIAATNNDIRQSINHIALLSA 680
            ...:.:.|: :::|..|.|..:...:..||..|..:........::.|...|||:||.::.... 
Human  1342 FSLMFDGCFEEIKFSTPSLLNVASYLQMICLTENFRTDVKDFVTLLTANTCDIRKSILYLQFWI- 1405

  Fly   681 KEDASQKSGQQVATKDLKLGPWEVVRKVFTADEHKHMSFADKSDLFFHDYSLAPLFVQQNYLQVL 745
                  :||..|    |:..|..:.|           ..:....|...::.|      .|  ::.
Human  1406 ------RSGGGV----LEERPLTLYR-----------GNSRNVQLVCSEHGL------DN--KIY 1441

  Fly   746 PQGNKKDVLAKVAATADALSLGDLVEKRI-----RANSAWSLLPTQAFFSSVLPGEHMCGHFTGQ 805
            |:..||                    ||:     .:..|.:|...:..||   |.|.:......:
Human  1442 PKNTKK--------------------KRVDLPKCDSGCAETLFGLKNIFS---PSEDLFSFLKHK 1483

  Fly   806 INFPGWLGKNSKSGKRARLAQELHDHTRVCTSGSRLSVRLDYAPFLLDNI--VRPLAKDGQEGVP 868
            |.                :.:|.|...::.|.....:|     .||..|:  :.||         
Human  1484 IT----------------MKEEWHKFIQLLTEFQMRNV-----DFLYSNLEFILPL--------- 1518

  Fly   869 AALDVMKDYHLLREDLDSLVELTSWPGKKSPLDAVDGRVKAALTRSYNKEVMAYSYSAQ----AG 929
                          .:|::.|..::.|....:||      :|.|:|.|.....:|...|    :.
Human  1519 --------------PVDTIPETKNFCGPSVTVDA------SAATKSMNCLARKHSEREQPLKKSQ 1563

  Fly   930 IKKKKSEAAGADD--------DYLDE----------GPGEEDGAGGHLSSEEDEDKDNLELDSLI 976
            .||:|......||        |:.|:          ...||...|...|...|:. :|.|....|
Human  1564 KKKQKKTLVILDDSDLFDTDLDFPDQSISLSSVSSSSNAEESKTGDEESKARDKG-NNPETKKSI 1627

  Fly   977 KAKKRTTTSK 986
            ....:||..|
Human  1628 PCPPKTTAGK 1637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gnf1NP_001014605.1 COG5275 <151..358 CDD:227600 64/333 (19%)
BRCT 232..309 CDD:278934 19/94 (20%)
PRK04195 421..969 CDD:235250 125/702 (18%)
AAA 506..633 CDD:278434 41/232 (18%)
RFC1 764..917 CDD:285691 26/159 (16%)
ATAD5XP_011523571.1 P-loop_NTPase 1129..>1174 CDD:304359 17/44 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5275
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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