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Protein Alignment Gnf1 and crlf3

DIOPT Version :9

Sequence 1:	NP_001014605.1	Gene:	Gnf1 / 40607	FlyBaseID:	FBgn0004913	Length:	1008	Species:	Drosophila melanogaster
Sequence 2:	NP_001017817.2	Gene:	crlf3 / 550515	ZFINID:	ZDB-GENE-050417-354	Length:	444	Species:	Danio rerio

Alignment Length:	364	Identity:	65/364 - (17%)
Similarity:	102/364 - (28%)	Gaps:	132/364 - (36%)

- Green bases have known domain annotations that are detailed below.

  Fly   308 LIREKSGIAKQVKEEKKSPKKEHSSEEKGKKEVKTSRRSSDKKEKEATKLKYGE----------- 361
            |::|    ||:..|..::.:.|......|..:.:...|.|..:.:||.:..:.|
Zfish     8 LLQE----AKESIEAAQNYRSELQQRLHGLSQARKQVRGSASQTREALQRHFQELQTAVSRLLID 68

  Fly   362 ---------------------------KHDI--AKHKVKEEHT----SPKETKDKLNDVPAVTLK 393
                                       :|.:  |...::|...    |..||:|||.......|:
Zfish    69 RLNGLLQEVDNIELDSVSPLDDCQKLIEHGVSTADELLREGEAAIRCSINETEDKLGSFTKKALQ 133

  Fly   394 VKKEPSSQKEHPPSPRTADLKTLD--------------VVGMAWVDKHKPTSIKEIVGQAGAA-- 442
            ::.:     ..|..|...|:..|.              |.....|..|.|..|:|:|.:.|..
Zfish   134 IQLD-----SLPEVPSLVDVPCLSAQLDDSLLHMFRAHVARHGSVASHPPVQIEELVERPGGVLV 193

  Fly   443 --------------------SNVTNHNLKLKAKQERVKVLHYFNFPRL-------------MNWL 474
                                ||.:.:......|.....|||.  .|.:             ..|
Zfish   194 RWCKVDDDFSPQDYRLQFRRSNSSQYEDAYIGKDTEFLVLHL--DPHVDHLFRVCARGEGRTEW- 255

  Fly   475 SKWYVNHDGNKKPQRPNPWAKNDDG---SFYKAALL---SGPPGIG------------------K 515
            |.|.:...| .....|:.|....||   |..|...:   |..||.|                  |
Zfish   256 SPWSIPQTG-YTTLAPHEWCPGVDGYILSSRKNIAMRSDSSAPGHGGVLYSNSPTYFCGQTLTFK 319

  Fly   516 TTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSN 554
            .|.|....|.........:.:||.|  |.:|:...:.:|
Zfish   320 ITAAGQTDKRDSLGVCADSRTDTDS--LQRDQAVCISTN 356

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.