Sequence 1: | NP_001014605.1 | Gene: | Gnf1 / 40607 | FlyBaseID: | FBgn0004913 | Length: | 1008 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001334286.1 | Gene: | Rfc1 / 19687 | MGIID: | 97891 | Length: | 1132 | Species: | Mus musculus |
Alignment Length: | 1161 | Identity: | 427/1161 - (36%) |
---|---|---|---|
Similarity: | 601/1161 - (51%) | Gaps: | 243/1161 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 AKAKSAEAENGETPSKAPKRRKAVIISSDEDEVVSPPETKKRKASKTA--------SSEDDV--V 68
Fly 69 AATPEP---IAKKA-----RNG----------------------QKPALSKLKRHVDPT---ELF 100
Fly 101 GGET-----KRVIVPKPKTK-----------------------AVLE---FENEDIDRSL----- 129
Fly 130 --------------------MEVDLDESIKEAAPEK-KVHSITRSSPSPK-----RAKNSSPEPP 168
Fly 169 K----------PKST------------------------KSKATTPRVKKEKPAADLESSVLTDE 199
Fly 200 ---ERHERKRASAVLYQKYKNRSSCLNPGSKEIPKGSPDCLSGLTFVVTGVLESMEREEAESVIK 261
Fly 262 EYGGKVMTVVGKKLKYLVVGEEAGPKKLAVAEELNIPILSEDGLFDLIREKSG--------IAKQ 318
Fly 319 VKEEKKSPKKEHSSEEKGKKEVKTSRRSSDKKEKEATKLKYGEKHDIAKHKVKEEHTSPKETKDK 383
Fly 384 LNDVPAVTLKVKKEPSSQKEHPPSPRTADLKTLDVVG---------MAWVDKHKPTSIKEIVGQA 439
Fly 440 GAASNVTNHNLKLKAKQERVKVLHYFNFPRLMNWLSKWYVNHDGNKK-PQRPNPWAKNDDGSFYK 503
Fly 504 AALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSNKSLSGYFT-GQGQA 567
Fly 568 VSRKHVLIMDEVDGMAGNEDRGGMQELIALIKDSSIPIICMCNDRNHPKIRSLVNYCYDLRFQRP 632
Fly 633 RLEQIKGKIMSICFKEKVKISPAKVEEIIAATNNDIRQSINHIALLSAKEDA----SQKSGQQVA 693
Fly 694 TKDLKLGPWEVVRKVFTA-DEHKHMSFADKSDLFFHDYSLAPLFVQQNYLQVLP---QGNKKDVL 754
Fly 755 AKVAATADALSLGDLVEKRIRANSAWSLLPTQAFFSSVLPGEHMCGHFTGQINFPGWLGKNSKSG 819
Fly 820 KRARLAQELHDHTRVCTSGSRLSVRLDYAPFLLDNIVRPLAKDGQEGVPAALDVMKDYHLLREDL 884
Fly 885 DSLVELTSWPGKKSPLDAVDGRVKAALTRSYNKEVMAYSYSAQAGIKKKKSEAAGADDDYLDEGP 949
Fly 950 GEEDGAGGHLSSEEDEDKDNLELDSLIKAKKRTTTSKASGGSKKATSSTASKSKAK 1005 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gnf1 | NP_001014605.1 | COG5275 | <151..358 | CDD:227600 | 86/256 (34%) |
BRCT | 232..309 | CDD:278934 | 43/76 (57%) | ||
PRK04195 | 421..969 | CDD:235250 | 266/557 (48%) | ||
AAA | 506..633 | CDD:278434 | 91/127 (72%) | ||
RFC1 | 764..917 | CDD:285691 | 68/152 (45%) | ||
Rfc1 | NP_001334286.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 14..87 | 10/44 (23%) | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 92..111 | 5/18 (28%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 120..201 | 16/83 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 225..378 | 28/152 (18%) | |||
Interferon-stimulated-response-element binding region | 354..528 | 70/173 (40%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 491..525 | 6/33 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167848146 | |
Domainoid | 1 | 1.000 | 156 | 1.000 | Domainoid score | I4192 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2187 | |
Inparanoid | 1 | 1.050 | 648 | 1.000 | Inparanoid score | I790 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1907 |
OMA | 1 | 1.010 | - | - | QHG52880 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003699 | |
OrthoInspector | 1 | 1.000 | - | - | oto95198 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101059 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23389 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1087 |
SonicParanoid | 1 | 1.000 | - | - | X3601 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.880 |