DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment opa and ZIC3

DIOPT Version :9

Sequence 1:NP_001368991.1 Gene:opa / 40605 FlyBaseID:FBgn0003002 Length:688 Species:Drosophila melanogaster
Sequence 2:NP_003404.1 Gene:ZIC3 / 7547 HGNCID:12874 Length:467 Species:Homo sapiens


Alignment Length:482 Identity:195/482 - (40%)
Similarity:237/482 - (49%) Gaps:148/482 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 GYGHFNSYASRDFLLGRRE-AEYGV---AGSAGQASAAADSMLFSGFPAQAAELGSG-------- 127
            |.|.|.  |.|...:..|| |..|:   ..|...|:|||.:..|...||.|.:|.||        
Human    15 GVGSFG--APRHHEMPNREPAGMGLNPFGDSTHAAAAAAAAAAFKLSPAAAHDLSSGQSSAFTPQ 77

  Fly   128 -------FGQHPFHSHHHHH------------------------QMRMGMADAYAAGHPYNHHGN 161
                   .|.|..|.|||||                        |...|:::|.:.|   ..||.
Human    78 GSGYANALGHHHHHHHHHHHTSQVPSYGGAASAAFNSTREFLFRQRSSGLSEAASGG---GQHGL 139

  Fly   162 FPTAA--VHHP--VVHHPSH------HAMSAMHPA------------------------------ 186
            |..:|  :|.|  :...||:      |...|.||:                              
Human   140 FAGSASSLHAPAGIPEPPSYLLFPGLHEQGAGHPSPTGHVDNNQVHLGLRGELFGRADPYRPVAS 204

  Fly   187 ------------------------------GAGAFLRYMRHQPASSASSVKQEMQCLWIDPDQPG 221
                                          |.|||.|||| ||      :|||:.|.|||..|  
Human   205 PRTDPYAAGAQFPNYSPMNMNMGVNVAAHHGPGAFFRYMR-QP------IKQELSCKWIDEAQ-- 260

  Fly   222 LVPPGGRKTCNKVFHSMHEIVTHLTVEHVGGPECTTHACFWVGCSRNGRPFKAKYKLVNHIRVHT 286
            |..|  :|:|::.|.:|||:|||:|:|||||||...|.|:|..|.|.|:.|||||||||||||||
Human   261 LSRP--KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 323

  Fly   287 GEKPFACPHPGCGKVFARSENLKIHKRTHTGEKPFKCEHEGCDRRFANSSDRKKHSHVHTSDKPY 351
            |||||.||.|||||:|||||||||||||||||||||||.||||||||||||||||.|||||||||
Human   324 GEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPY 388

  Fly   352 NCRINGCDKSYTHPSSLRKHMKVHGNVDEKSPSHGYDSEGEESSSSSIITGGAQTPPSTRLDGSA 416
            .|::  ||||||||||||||||||            :|:|.:||.::.....:.|||:.....|.
Human   389 ICKV--CDKSYTHPSSLRKHMKVH------------ESQGSDSSPAASSGYESSTPPAIASANSK 439

  Fly   417 GSSSGVSSLSGGSGIKSSPHSIKSEPN 443
            .::...|::.     .|:.|:....||
Human   440 DTTKTPSAVQ-----TSTSHNPGLPPN 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
opaNP_001368991.1 zf_ZIC 206..253 CDD:408166 24/46 (52%)
C2H2 Zn finger 265..285 CDD:275368 15/19 (79%)
SFP1 <287..373 CDD:227516 75/85 (88%)
C2H2 Zn finger 293..315 CDD:275368 19/21 (90%)
C2H2 Zn finger 323..345 CDD:275368 19/21 (90%)
C2H2 Zn finger 353..375 CDD:275368 17/21 (81%)
ZIC3NP_003404.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..107 11/40 (28%)
Nuclear localization signal 297..322 17/24 (71%)
C2H2 Zn finger 302..322 CDD:275368 15/19 (79%)
SFP1 <324..408 CDD:227516 75/85 (88%)
C2H2 Zn finger 330..352 CDD:275368 19/21 (90%)
Nuclear localization signal 330..352 19/21 (90%)
C2H2 Zn finger 360..382 CDD:275368 19/21 (90%)
C2H2 Zn finger 390..410 CDD:275368 17/21 (81%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 404..467 20/75 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I10108
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 341 1.000 Inparanoid score I2358
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000467
OrthoInspector 1 1.000 - - otm41195
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19818
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X217
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
77.150

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