DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ARNTL and Clk

DIOPT Version :9

Sequence 1:XP_016873227.1 Gene:ARNTL / 406 HGNCID:701 Length:674 Species:Homo sapiens
Sequence 2:NP_001014576.1 Gene:Clk / 38872 FlyBaseID:FBgn0023076 Length:1027 Species:Drosophila melanogaster


Alignment Length:611 Identity:155/611 - (25%)
Similarity:249/611 - (40%) Gaps:167/611 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    96 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRM 160
            ||||....|           .|::.:..||:|||:.||.:::|::|:.|   .|||:||.|||:.
  Fly     7 DKDDTKSFL-----------CRKSRNLSEKKRRDQFNSLVNDLSALIST---SSRKMDKSTVLKS 57

Human   161 AVQHMKTLRGATNP----YTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFK 221
            .:..:|....||:.    ..:.::||.|||:||..||:|.:.|||:.|.. ..|.|.:.|||:..
  Fly    58 TIAFLKNHNEATDRSKVFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFS-SMGSIFYASESITS 121

Human   222 ILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDA-KTGLPVKTDITPGPSRLCSG 285
            .|.|...||...:::|..:..|               .|.|::. ....||   |.|..:.:.|.
  Fly   122 QLGYLPQDLYNMTIYDLAYEMD---------------HEALLNIFMNPTPV---IEPRQTDISSS 168

Human   286 ARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDED------ 344
            .:.:|:..::..               ..:|.|..::..:...||.::...|..|...:      
  Fly   169 NQITFYTHLRRG---------------GMEKVDANAYELVKFVGYFRNDTNTSTGSSSEVSNGSN 218

Human   345 -----------NEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRV---KSMEYVSRHAIDGKFVF 395
                       ..|:.|.......|..||:.:   ||.:. |:.:   .|.|:.|:|:::.||:|
  Fly   219 GQPAVLPRIFQQNPNAEVDKKLVFVGTGRVQN---PQLIR-EMSIIDPTSNEFTSKHSMEWKFLF 279

Human   396 VDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGSFITL 459
            :|.||..|:.|:|.|:||||.|:|:|.||:..:..||.::.||.|  ..:| |:|..|...:|.|
  Fly   280 LDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGE--GKSCYYRFLTKGQQWIWL 342

Human   460 RSRWFSFMNPWTKEVEYIVSTNTVV-LANVL-----EG--------------------------- 491
            ::.::...:.:..:.:|:|.|:.|| .|.||     ||                           
  Fly   343 QTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLKDSRKEGQKSGNSNSITNNGSSKVIASTGTSSKS 407

Human   492 --GDPTFPQLTASPHSMDSMLPSGEDSFVVGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEI 554
              ...|......|..::||.| .|.....:|  ..|..|.|.:.......|..:           
  Fly   408 ASATTTLRDFELSSQNLDSTL-LGNSLASLG--TETAATSPAVDSSPMWSASAV----------- 458

Human   555 HRIRGSSPS-SCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSS 618
                  .|| ||..:||. ||.|   |||.|          :|.|:| :|.:|:.. .|.|::..
  Fly   459 ------QPSGSCQINPLK-TSRP---ASSYG----------NISSTG-ISPKAKRK-CYFYNNRG 501

Human   619 SILGENPHIGIDMIDNDQGSSSPSND 644
                           ||..|:|.|.|
  Fly   502 ---------------NDSDSTSMSTD 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ARNTLXP_016873227.1 None
ClkNP_001014576.1 HLH 16..68 CDD:238036 20/54 (37%)
PAS 93..153 CDD:214512 20/75 (27%)
PAS 264..366 CDD:238075 37/103 (36%)
PAS_11 265..368 CDD:291273 37/104 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3561
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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