DRSC/TRiP Functional Genomics Resources

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Protein Alignment BMAL1 and tai

DIOPT Version :10

Sequence 1:XP_016873227.1 Gene:BMAL1 / 406 HGNCID:701 Length:674 Species:Homo sapiens
Sequence 2:NP_001245949.1 Gene:tai / 34242 FlyBaseID:FBgn0041092 Length:2047 Species:Drosophila melanogaster


Alignment Length:779 Identity:144/779 - (18%)
Similarity:254/779 - (32%) Gaps:283/779 - (36%)


- Green bases have known domain annotations that are detailed below.


Human    63 PTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRR 127
            |....|::..|||....||     ||.:.::.               |.:|.....     ||||
  Fly   208 PISANSANSATSGRKIRRK-----TDSKVNLP---------------QSQINKCNN-----EKRR 247

Human   128 RDKMNSFIDELASLVPTCN----AMSRKLDKLTVLRMAVQHMKTL--RG---------------- 170
            |:..|.:|::|:.:: |.|    ..|.|.||..:|...|:..:.:  :|                
  Fly   248 REAENGYIEQLSEIL-TLNKRGDMTSTKPDKAAILNQVVRTYREICDKGQNRDISSTSTNNNNST 311

Human   171 -ATNPYTEAN-----YKPTFLSD------------------------------------------ 187
             .||..|.:|     .||...|.                                          
  Fly   312 TTTNNNTNSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPLPEPSLLLGQVPEISA 376

Human   188 --DELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQ 250
              :.|:|.|  :..|::.:.....|.|...::::..::.|.:.:|..|.|:.||:..|.||::..
  Fly   377 YFEALEHYI--SGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYLYSGDHAKLEPI 439

Human   251 L-------------SSSDTAPRERLIDAKTGLPVKTDITP-------------------GPSRLC 283
            :             |::::.|...  .|.|...|..|:..                   |.....
  Fly   440 INTMYNNPNGGNSNSANNSGPGGS--SAGTSAGVWGDLEELNNGNASQGSNSSGAGGLGGAGGAA 502

Human   284 SGARRSFFCRMKCNRPSVKVED----KDFPSTCSKKKADRKSFCTIHSTGYLKSW-------PPT 337
            :|.:||...:::     :.|:|    ....|.|.:|        .:..:|:...:       .|.
  Fly   503 AGKKRSISTKVR-----MLVKDTRTATQTSSNCEEK--------PLRQSGHQDKYEEVVLIAAPV 554

Human   338 KMGLDEDNEPDNEGCNLSCLVAIGR----------LHSHVVPQPVNGEIRVKSMEYVSRHAIDGK 392
            |         |:...:.|.|..|.|          :..||..||:.        :...:..|.||
  Fly   555 K---------DDADASSSVLCLITRPEDESPLEINIQQHVQQQPIE--------QMTFKLDIHGK 602

Human   393 FVFVDQRATAILAYLPQEL---LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTN--------- 445
            .:.:|  .||:.....|.|   :|....:..|..|:..|....|.:   ::..:.|         
  Fly   603 ILTLD--PTALREPFKQHLQTWVGRLWQDLCHPHDLSTLKSHLRDI---QDSASANSPGAGAGTS 662

Human   446 --CYKFKIKDGS---FITLRSRWFSFMNPWTKEVEYIVSTNTVV-------LANVLEG-GDPTFP 497
              ...|:::.|:   ::.:::....|:|....|.::|:|..|::       .:|...| |.....
  Fly   663 VVSRPFRLRLGAPDVYVHVKANSRLFLNQTPGEGDFIMSVQTLLNSENDMNSSNTGAGSGGLGLG 727

Human   498 QLTA---SPHSMDSMLPSGEDSFVVGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRG 559
            ||.|   ||....|:|.|              .::.|:.|||.:|:                  .
  Fly   728 QLCAMAPSPSLASSLLSS--------------LSMDGLHGGTGSGS------------------S 760

Human   560 SSPSSCGSSPLNITSTPPPDASSPGG---KKILNGGTPDIPSSGLLSG-------QAQENPGYPY 614
            |||::.|..|.::...........||   .:..:.|.| :.||.:::|       |.|:..|...
  Fly   761 SSPAASGMLPTHLLGGLVGGGQQGGGGNSTQTTSVGGP-LMSSAIINGTGLQQQQQQQQRSGASS 824

Human   615 SDSSS------------ILGENPHIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADAGLGGPVD 666
            |.|||            ...|:...|.|..:.|..:.|.|.:          |:...|:|...|
  Fly   825 SASSSANALVNAFTASPAPAEHSFYGSDTFEFDIAAHSSSFE----------LDPSGGVGAWTD 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BMAL1XP_016873227.1 bHLH-PAS_ARNTL_PASD3 110..173 CDD:381444 19/85 (22%)
PAS 192..251 CDD:214512 14/58 (24%)
PAS_11 382..484 CDD:464214 22/118 (19%)
taiNP_001245949.1 bHLH_SF 239..291 CDD:469605 16/57 (28%)
PAS 377..442 CDD:214512 15/66 (23%)
PAS_11 590..711 CDD:464214 22/133 (17%)

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