DRSC/TRiP Functional Genomics Resources

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Protein Alignment BMAL1 and Met

DIOPT Version :10

Sequence 1:XP_016873227.1 Gene:BMAL1 / 406 HGNCID:701 Length:674 Species:Homo sapiens
Sequence 2:NP_511126.2 Gene:Met / 32114 FlyBaseID:FBgn0002723 Length:716 Species:Drosophila melanogaster


Alignment Length:732 Identity:161/732 - (21%)
Similarity:266/732 - (36%) Gaps:226/732 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    68 SSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMN 132
            :.|.|::|...:....||.:.       ...||             .|.|||.:..||:||||:|
  Fly     9 TGSTGSAGSTGSGSGSGSGSG-------SSSDP-------------ANGREARNLAEKQRRDKLN 53

Human   133 SFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL----RGATNPYTEANYKPTFLSDD---EL 190
            :.|.|||::||.....||:|||..|||.|...::..    :.|:....:...|.|.:|..   :|
  Fly    54 ASIQELATMVPHAAESSRRLDKTAVLRFATHGLRLQYVFGKSASRRRKKTGLKGTGMSASPVGDL 118

Human   191 KHLILRAADGFLFVVGC------DRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKE 249
            .:..|...|..:.::.|      ..|:|:.||.||.::|.:.|:||.||:|....||.|...:::
  Fly   119 PNPSLHLTDTLMQLLDCCFLTLTCSGQIVLVSTSVEQLLGHCQSDLYGQNLLQITHPDDQDLLRQ 183

Human   250 QL---------------------------------SSSDTAPRE------RL------IDAKTGL 269
            ||                                 |.||....|      ||      .|.....
  Fly   184 QLIPRDIETLFYQHQHHQQQGHNPQQHSTSTSASTSGSDLEEEEMETEEHRLGRQQGEADDDEDH 248

Human   270 PVKTDITPGPSRLCSGA---------RRSFFCRMKCNRPSVKVEDKDFPST--CSKKKAD---RK 320
            |.... ||.|.|:...|         ||.|..|:.  |.|.:.|     :|  ..:.|.|   |:
  Fly   249 PYNRR-TPSPRRMAHLATIDDRLRMDRRCFTVRLA--RASTRAE-----ATRHYERVKIDGCFRR 305

Human   321 SFCTIHSTGYLKSWPPTKMGLDEDNE------------------PDNEGC----------NLSCL 357
            |..:: :.|...::|.....:.....                  |.::..          |...|
  Fly   306 SDSSL-TGGAAANYPIVSQLIRRSRNNNMLAAAAAVAAEAATVPPQHDAIAQAALHGISGNDIVL 369

Human   358 VAIGR-LHSHVVPQPVNGEIRVK--------SMEYVSRHAIDGKFVFVDQRATAILAYLPQELLG 413
            ||:.| |.....|:...|.:.:.        .:||.:||.|||..:..|||...:..|:..|:..
  Fly   370 VAMARVLREERPPEETEGTVGLTIYRQPEPYQLEYHTRHLIDGSIIDCDQRIGLVAGYMKDEVRN 434

Human   414 TSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIV 478
            .|.:.:.|.||:..:....||:.........:||:...::|.||.|.::.|..::..:.:|...:
  Fly   435 LSPFCFMHLDDVRWVIVALRQMYDCNSDYGESCYRLLSRNGRFIYLHTKGFLEVDRGSNKVHSFL 499

Human   479 STNTVV---------------LANVLEGGDPT---FPQLTASP----------HSMDSMLPSGED 515
            ..||::               .:.:::...||   .|.|.||.          :.::::..|.:.
  Fly   500 CVNTLLDEEAGRQKVQEMKEKFSTIIKAEMPTQSSSPDLPASQAPQQLERIVLYLIENLQKSVDS 564

Human   516 SFVVGG-------------PKRT--------HPT-----VPGIPGGTRAGAGK----IGRMIAEE 550
            :..|||             |..|        .||     ||..|...::...|    :....|.:
  Fly   565 AETVGGQGMESLMDDGYSSPANTLTLEELAPSPTPALALVPPAPSSVKSSISKSVSVVNVTAARK 629

Human   551 IMEIH---------RIRGSSPSSCG-----SSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGL 601
            ..:.|         :::..:.|:.|     ||.|:...|    ||.     ||:      |:|.|
  Fly   630 FQQEHQKQRERDREQLKERTNSTQGVIRQLSSCLSEAET----ASC-----ILS------PASSL 679

Human   602 LSGQAQENPGYPYSDSS 618
            .:.:|.:.|. |:|::|
  Fly   680 SASEAPDTPD-PHSNTS 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BMAL1XP_016873227.1 bHLH-PAS_ARNTL_PASD3 110..173 CDD:381444 27/66 (41%)
PAS 192..251 CDD:214512 19/64 (30%)
PAS_11 382..484 CDD:464214 28/101 (28%)
MetNP_511126.2 bHLH_PAS 38..89 CDD:381397 25/50 (50%)
PAS 137..>186 CDD:238075 17/48 (35%)
PAS_11 401..510 CDD:464214 28/108 (26%)

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