DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmppb and glmU

DIOPT Version :10

Sequence 1:NP_649498.1 Gene:Gmppb / 40599 FlyBaseID:FBgn0037279 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_418186.1 Gene:glmU / 948246 ECOCYCID:EG11198 Length:456 Species:Escherichia coli


Alignment Length:408 Identity:94/408 - (23%)
Similarity:151/408 - (37%) Gaps:88/408 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGNGTRALILVGGYGTRLRPLTLSTPKPLVEFANKPILLHQLEALVDAGCRQVILAVSYRAEQME 71
            :.|....:||..|.|||:..   ..||.|...|.|.::.|.::|..:.|...|.|...:..:.::
E. coli     2 LNNAMSVVILAAGKGTRMYS---DLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLK 63

  Fly    72 KELKVEAKKLGVELIFSHETEPLGTAGPLALAKTILAASSEPFFVLNSDVIC---DFPF-----K 128
            :.||.:      .|.:..:.|.|||...:..|        .|||..:.|::.   |.|.     .
E. coli    64 QALKDD------NLNWVLQAEQLGTGHAMQQA--------APFFADDEDILMLYGDVPLISVETL 114

  Fly   129 QLVQFHCNHGKEGTIVVTKVEEPSKYGVVLYDENGCIKNFIE----KPQEFVSNKINAGIYIFNP 189
            |.::.....|..|.:.| |:::|:.||.:. .|||.:...:|    ..::....:||.||.|.|.
E. coli   115 QRLRDAKPQGGIGLLTV-KLDDPTGYGRIT-RENGKVTGIVEHKDATDEQRQIQEINTGILIANG 177

  Fly   190 SVLDRIEVKPTSIEKE---------------------VFPEMTQQQE-----LYAMDLTGFWMDI 228
            :.:.|...|.|:...:                     |.|:...:.|     |....|...:...
E. coli   178 ADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQSE 242

  Fly   229 GQPKDFLTGMCL-------YLSSLRQKQSPKLYTGPGVVGNVLVDPTAKIGEGC-----RIGPNV 281
            ...|..|.|:.|       ...:|...:..::.|...:.|||.:....|||.||     .||.:.
E. coli   243 QAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDC 307

  Fly   282 TIGPDVVIEDGVCIKRSTI------------LKGAIVRSHSWLDSCIVGWRSTVGRWVRIEGITV 334
            .|.|..|:||.......||            |:||.|.:...:....:|..|..|.      :|.
E. coli   308 EISPYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGH------LTY 366

  Fly   335 LGEDVIVKDELYINGGQV 352
            || |..:.|.:.|..|.:
E. coli   367 LG-DAEIGDNVNIGAGTI 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmppbNP_649498.1 M1P_guanylylT_B_like_N 12..242 CDD:133047 60/274 (22%)
LbetaH 264..343 CDD:469633 25/95 (26%)
glmUNP_418186.1 glmU 1..456 CDD:181867 94/408 (23%)

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