DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmppb and rfbA

DIOPT Version :10

Sequence 1:NP_649498.1 Gene:Gmppb / 40599 FlyBaseID:FBgn0037279 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_416543.1 Gene:rfbA / 945154 ECOCYCID:EG11978 Length:293 Species:Escherichia coli


Alignment Length:251 Identity:61/251 - (24%)
Similarity:119/251 - (47%) Gaps:13/251 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RALILVGGYGTRLRPLTLSTPKPLVEFANKPILLHQLEALVDAGCRQVILAVSYRAEQMEKELKV 76
            :.:||.||.||||.|:|::..|.|:...:||::.:.|..|:.||.|.:::..:.:.....::|..
E. coli     5 KGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLG 69

  Fly    77 EAKKLGVELIFSHETEPLGTAGPLALAKTILAASSEPFFVLNSDVICDFPFKQLVQFHCNHGKEG 141
            :..:.|:.|.:..:..|.|.|....:.:..: ...:...||..::.......:|::...|.....
E. coli    70 DGSQWGLNLQYKVQPSPDGLAQAFIIGEEFI-GGDDCALVLGDNIFYGHDLPKLMEAAVNKESGA 133

  Fly   142 TIVVTKVEEPSKYGVVLYDENGCIKNFIEKPQEFVSNKINAGIYIFNPSVLDRIEVKPTSIEKEV 206
            |:....|.:|.:||||.:|:||...:..|||.|..||....|:|.::..|:...:....|...|:
E. coli   134 TVFAYHVNDPERYGVVEFDKNGTAISLEEKPLEPKSNYAVTGLYFYDNDVVQMAKNLKPSARGEL 198

  Fly   207 FPEMTQQQELY--------AMDLTGF-WMDIGQPKDFLTGMCLYLSSLRQKQSPKL 253
              |:|....:|        ||...|: |:|.|..:..:.. ..:::::.::|..|:
E. coli   199 --EITDINRIYLEQGRLSVAMMGRGYAWLDTGTHQSLIEA-SNFIATIEERQGLKV 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmppbNP_649498.1 M1P_guanylylT_B_like_N 12..242 CDD:133047 59/238 (25%)
LbetaH 264..343 CDD:469633
rfbANP_416543.1 rmlA 5..290 CDD:130274 61/251 (24%)
Blue background indicates that the domain is not in the aligned region.

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