DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1129 and GCD6

DIOPT Version :9

Sequence 1:NP_001189177.2 Gene:CG1129 / 40599 FlyBaseID:FBgn0037279 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_010497.3 Gene:GCD6 / 851797 SGDID:S000002619 Length:712 Species:Saccharomyces cerevisiae


Alignment Length:408 Identity:98/408 - (24%)
Similarity:162/408 - (39%) Gaps:85/408 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RALILVGGYGTRLRPLTLSTPKPLVEFANKPILLHQLEALVDAGCRQVILAVSYRAEQMEKELKV 76
            :|::|...|.||..|||...|:.|:..||.|::.:.||.|..||..:|.|..|..|.|:...::.
Yeast    28 QAVVLTDSYETRFMPLTAVKPRCLLPLANVPLIEYTLEFLAKAGVHEVFLICSSHANQINDYIEN 92

  Fly    77 EAKKL-----GVELIFSHETEPLGTAGPLALAKTILAASSEPFFVLNSDVICDFPFKQLVQFH-- 134
            ....|     .:..|.|.|....|........:.|:...   |.:::.||:.:..|.::::||  
Yeast    93 SKWNLPWSPFKITTIMSPEARCTGDVMRDLDNRGIITGD---FILVSGDVLTNIDFSKMLEFHKK 154

  Fly   135 -----CNH------GKEGTIVVTKVEEPSKYGVVLYDENGCI------------KNFIEKPQEFV 176
                 .:|      .|..|...|:..||:.: |:....:.||            |..|:...|.:
Yeast   155 MHLQDKDHISTMCLSKASTYPKTRTIEPAAF-VLDKSTSRCIYYQDLPLPSSREKTSIQIDPELL 218

  Fly   177 SNKINAGIYIFNPSVLD-RIEVKPTSIEKEVFPEMTQQQEL--------YAMDLTG--------- 223
            .   |...::....::| ||:: .||....:|.|....|.|        .:.|:.|         
Yeast   219 D---NVDEFVIRNDLIDCRIDI-CTSHVPLIFQENFDYQSLRTDFVKGVISSDILGKHIYAYLTD 279

  Fly   224 -------FWM---DIGQPKDFLTGMCLYL---SSLRQKQ-----SPKLYTGPGVV-------GN- 262
                   .|.   .|.|  |||...|..|   |:::..|     |..:|....||       |. 
Yeast   280 EYAVRVESWQTYDTISQ--DFLGRWCYPLVLDSNIQDDQTYSYESRHIYKEKDVVLAQSCKIGKC 342

  Fly   263 VLVDPTAKIGEGCRIGPNVTIGPDVVIEDGVCIKRSTILKGAIVRSHSWLDSCIVGWRSTVGRWV 327
            ..:....|||||.:| .|..||.:..|.:.:.||.|.|....|:.::|.:|..::...:|:|..|
Yeast   343 TAIGSGTKIGEGTKI-ENSVIGRNCQIGENIRIKNSFIWDDCIIGNNSIIDHSLIASNATLGSNV 406

  Fly   328 RIEGITVLGEDVIVKDEL 345
            |:....::|.:|.:.|.:
Yeast   407 RLNDGCIIGFNVKIDDNM 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1129NP_001189177.2 GCD1 12..361 CDD:224129 98/408 (24%)
M1P_guanylylT_B_like_N 12..242 CDD:133047 66/287 (23%)
LbetaH 264..343 CDD:294107 23/78 (29%)
GCD6NP_010497.3 eIF-2B_epsilon_N 27..243 CDD:133040 53/222 (24%)
glgC <256..408 CDD:179486 37/154 (24%)
LbH_eIF2B_epsilon 344..422 CDD:100061 23/78 (29%)
W2_eIF2B_epsilon 550..704 CDD:211396
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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