DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmppb and APL2

DIOPT Version :10

Sequence 1:NP_649498.1 Gene:Gmppb / 40599 FlyBaseID:FBgn0037279 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_174089.1 Gene:APL2 / 839660 AraportID:AT1G27680 Length:518 Species:Arabidopsis thaliana


Alignment Length:449 Identity:91/449 - (20%)
Similarity:166/449 - (36%) Gaps:131/449 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ALILVGGYGTRLRPLTLSTPKPLVEFANKPILLH-QLEALVDAGCRQVILAVSYRAEQMEKELKV 76
            ::||.||.||||.|||....||.|.......|:. .:...:::|.|::.:...:.:..:.:.|. 
plant    87 SIILGGGAGTRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCINSGIRKIFILTQFNSFSLNRHLS- 150

  Fly    77 EAKKLG---------VELIFSHETEPLGTAGPLALAKTILAA-------------SSEPFFVLNS 119
            .....|         ||::.:.:|.  |.||......|..|.             :.|...:|:.
plant   151 RTYNFGNGVNFGDGFVEVLAATQTS--GDAGKKWFQGTADAVRQFIWVFEDAKTKNVEHVLILSG 213

  Fly   120 DVICDFPFKQLVQFHCNHGKEGTIVVTKVEE--PSKYGVVLYDENGCIKNFIEKPQ--EFVSNKI 180
            |.:....:...||.|.....:.|:....::|  .|.:|::..|::|.|..|.|||:  :..:.::
plant   214 DHLYRMDYMNFVQKHIESNADITVSCLPMDESRASDFGLLKIDQSGKIIQFSEKPKGDDLKAMQV 278

  Fly   181 NA-------------------GIYIFNPSVLDRI--EVKPTSIE--KEVFPEMTQQQELYAMDLT 222
            :.                   |:|:|...||.::  ...|||.:  .|:.|....:..:.|....
plant   279 DTSILGLPPKEAAESPYIASMGVYVFRKEVLLKLLRSSYPTSNDFGSEIIPLAVGEHNVQAFLFN 343

  Fly   223 GFWMDIGQPKDFL-TGMCLYLSSLRQKQSPK---------LYTGPGVVGNVLVDPTAKIGEGCRI 277
            .:|.|||....|. ..:.|      .:|.||         .:|.|..:      |..|: :.|||
plant   344 DYWEDIGTIGSFFDANLAL------TEQPPKFQFYDQKTPFFTSPRFL------PPTKV-DKCRI 395

  Fly   278 GPNVT---------------IGPDVVIEDGVCIKRSTILKGAI--------------------VR 307
            ..::.               :|....:|.||.: :.|::.||.                    |.
plant   396 LDSIVSHGCFLRECSVQHSIVGIRSRLESGVEL-QDTMMMGADFYQTEAEIASLLAEGKVPVGVG 459

  Fly   308 SHSWLDSCIVGWRSTVGRWVRI-------------------EGITVLGEDVIVKDELYI 347
            .::.:.:||:...:.:|:.|.|                   .||||:.::..::|.|:|
plant   460 QNTKIKNCIIDKNAKIGKNVVIANADGVEEGDRPEEGFHIRSGITVVLKNATIRDGLHI 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmppbNP_649498.1 M1P_guanylylT_B_like_N 12..242 CDD:133047 61/279 (22%)
LbetaH 264..343 CDD:469633 22/132 (17%)
APL2NP_174089.1 PLN02241 82..518 CDD:215133 90/447 (20%)

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