DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmppb and AT4G18300

DIOPT Version :10

Sequence 1:NP_649498.1 Gene:Gmppb / 40599 FlyBaseID:FBgn0037279 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_193564.1 Gene:AT4G18300 / 827556 AraportID:AT4G18300 Length:709 Species:Arabidopsis thaliana


Alignment Length:413 Identity:88/413 - (21%)
Similarity:149/413 - (36%) Gaps:99/413 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RALILVGGYGTRLRPLTLSTPKPLVEFANKPILLHQLEALVDAGCRQVILAVSYRAEQMEKELKV 76
            :|::|...:.|:.|.:||..||.|:...|.|::.:.|..|..||..:|.:.....:.|:...||.
plant    25 QAILLADSFTTQFRSITLERPKVLLPIVNIPMIDYTLAWLESAGIEEVFVFCCAHSSQIIDYLKK 89

  Fly    77 EA------KKLGVELIFSHETEPLGTAGPLALAKTILAASSE------PFFVLNSDVICDFPFKQ 129
            ..      ..|.|..|.||.:..:|.|     .:.|....:|      .|.:::.|.:.:.|...
plant    90 SEWYTRPNPNLLVRTIVSHNSTSVGDA-----LRYIYEQQTETSQIQGDFVLVSGDTVSNMPLAD 149

  Fly   130 LVQFHCNHGK--EGTIVVTKVEEPSKYGV----------------VLYDE------NGCIKNFIE 170
            |:|.|.:..|  |..|:....::.|:.|:                :.|:|      :.|:...:.
plant   150 LIQQHRDRKKKDEKAIMTMVFKKQSRLGIGSDQLFVAVDPLTKQLLHYEECNSRGGDFCLDKSLL 214

  Fly   171 KPQEFVSNKINAGIYIFNPSVLDRIE------------VKPTSIEK----EVFPEMTQQQ----- 214
            ......|:..:..|.|.:|.||...|            |....::.    ::|....|..     
plant   215 DSTVLCSDMQDCYIDICSPEVLSLFEDNFDYQHMRRHFVNGLLVDDIMGYKIFTHEIQSSCYAAR 279

  Fly   215 -------ELYAMDLTGFWMDIGQPK-DFLTGMCLYLSS---LRQKQSPKLYT---------GPGV 259
                   :..:.|:...|.....|. ||.....:.|..   .|...:.:.:|         |.|.
plant   280 IDNLRSYDTVSKDIIQRWTYPYVPNIDFSGNRPVKLGRRGIYRASDAVQSHTADVGASTVIGYGT 344

  Fly   260 -VGNVLVDPTAKIGEGCRIGPNVT-----IGPDVVIEDGVCIKRSTILKGAIVRSHSWLDSCIVG 318
             :||......:.||.||.||.||.     |..:|.||||..|:.:.:..|..||:.:.|...:| 
plant   345 KIGNGGKIYNSVIGNGCCIGSNVVIQGSYIWNNVTIEDGCEIRNAIVCDGVKVRAGAVLQPGVV- 408

  Fly   319 WRSTVGRWVRIEGITVLGEDVIV 341
                      :....|:|.|.:|
plant   409 ----------LSFSVVVGRDFVV 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmppbNP_649498.1 M1P_guanylylT_B_like_N 12..242 CDD:133047 57/294 (19%)
LbetaH 264..343 CDD:469633 24/83 (29%)
AT4G18300NP_193564.1 eIF-2B_epsilon_N 24..236 CDD:133040 46/215 (21%)
LbH_eIF2B_epsilon 339..417 CDD:100061 25/88 (28%)
W2_eIF2B_epsilon 539..702 CDD:211396
Blue background indicates that the domain is not in the aligned region.

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