DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gmppb and CYT1

DIOPT Version :10

Sequence 1:NP_649498.1 Gene:Gmppb / 40599 FlyBaseID:FBgn0037279 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_181507.1 Gene:CYT1 / 818562 AraportID:AT2G39770 Length:361 Species:Arabidopsis thaliana


Alignment Length:360 Identity:215/360 - (59%)
Similarity:284/360 - (78%) Gaps:2/360 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RALILVGGYGTRLRPLTLSTPKPLVEFANKPILLHQLEALVDAGCRQVILAVSYRAEQMEKELKV 76
            :|||||||:||||||||||.|||||:|||||::|||:|||...|..:|:||::|:.|.|...||.
plant     2 KALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALKAVGVDEVVLAINYQPEVMLNFLKD 66

  Fly    77 EAKKLGVELIFSHETEPLGTAGPLALAK-TILAASSEPFFVLNSDVICDFPFKQLVQFHCNHGKE 140
            ...||.:::..|.||||||||||||||: .:|..|.|||||||||||.::|.|::::||.:||.|
plant    67 FETKLEIKITCSQETEPLGTAGPLALARDKLLDGSGEPFFVLNSDVISEYPLKEMLEFHKSHGGE 131

  Fly   141 GTIVVTKVEEPSKYGVVLYDEN-GCIKNFIEKPQEFVSNKINAGIYIFNPSVLDRIEVKPTSIEK 204
            .:|:||||:||||||||:.:|: |.::.|:|||:.:|.||||||||:.||||||:||::||||||
plant   132 ASIMVTKVDEPSKYGVVVMEESTGRVEKFVEKPKLYVGNKINAGIYLLNPSVLDKIELRPTSIEK 196

  Fly   205 EVFPEMTQQQELYAMDLTGFWMDIGQPKDFLTGMCLYLSSLRQKQSPKLYTGPGVVGNVLVDPTA 269
            |.||::...|.||||.|.|||||||||:|::||:.|||.|||:|...||.:||.:|||||||.||
plant   197 ETFPKIAAAQGLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSPAKLTSGPHIVGNVLVDETA 261

  Fly   270 KIGEGCRIGPNVTIGPDVVIEDGVCIKRSTILKGAIVRSHSWLDSCIVGWRSTVGRWVRIEGITV 334
            .|||||.|||:|.|||..::|.||.:.|.|:::|..::.|:.:.|.|:||.||||:|.|||.:|:
plant   262 TIGEGCLIGPDVAIGPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIENMTI 326

  Fly   335 LGEDVIVKDELYINGGQVLPHKSIAASVPEPQIIM 369
            |||||.|.||:|.|||.|||||.|.:::.:|:|:|
plant   327 LGEDVHVSDEIYSNGGVVLPHKEIKSNILKPEIVM 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmppbNP_649498.1 M1P_guanylylT_B_like_N 12..242 CDD:133047 143/231 (62%)
LbetaH 264..343 CDD:469633 43/78 (55%)
CYT1NP_181507.1 M1P_guanylylT_B_like_N 1..234 CDD:133047 143/231 (62%)
LbetaH 256..335 CDD:469633 43/78 (55%)

Return to query results.
Submit another query.