DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gmppb and AT2G34970

DIOPT Version :10

Sequence 1:NP_649498.1 Gene:Gmppb / 40599 FlyBaseID:FBgn0037279 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_181042.1 Gene:AT2G34970 / 818061 AraportID:AT2G34970 Length:730 Species:Arabidopsis thaliana


Alignment Length:418 Identity:85/418 - (20%)
Similarity:144/418 - (34%) Gaps:121/418 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RALILVGGYGTRLRPLTLSTPKPLVEFANKPILLHQLEALVDAGCRQVIL---AVSYRA-EQMEK 72
            :|::|...:.|:.||:||..||.|:...|.|::.:.|..|..||..:|.:   |.|.:. |.:||
plant    26 QAILLADSFATKFRPVTLERPKVLLPIVNVPMIDYTLAWLESAGIEEVFVFCCAHSMQVIEYLEK 90

  Fly    73 ELKVEAKKLGVELIFSHETEPLGTAGPLALAKTILAASSEPFFVL-NSDVICDFPFKQLVQFHCN 136
            ........|.|..|.||::...|.|......:....:..:..||| :.|.:.:.|...|:|.|..
plant    91 SEWYSHPNLLVRTIESHKSISAGDALRYMYEQQTETSQIQGDFVLVSGDTVSNMPLADLIQEHRE 155

  Fly   137 H-GKEGTIVVTKVEEPSKYGVVLYDEN-GCIKNFI------EKPQEFVSNKIN--AGIYIFNPSV 191
            . .|:...::|.|.:.||...:.:... |..:.||      ::...:..:||:  :|......|:
plant   156 RKKKDEKAIMTMVIKQSKSSPLTHQSRLGTDQLFIAVDPLTKQLLHYEEDKIDHPSGSVCLEKSL 220

  Fly   192 LDRIEVKPTSIEKEVFPEMTQQQELYAMDLTGFWMDIGQPK------------------------ 232
            ||                 |....|...|:...::||..|:                        
plant   221 LD-----------------TNPSVLVCNDMQDCYIDICSPEVLSLFEDNFDYQHLRRHFVKGVLV 268

  Fly   233 DFLTGMCLYLSSLRQKQSPK----------------------------------------LYTGP 257
            |.:.|..::...:....:.:                                        :|...
plant   269 DDIMGYKIFTHEIHSSYAGRIDNFRSYDTVSKDIIQRWTYPYVPDINFSGNRPLKLGRQGIYKAS 333

  Fly   258 GVVGNVLVDPTAK-------------------IGEGCRIGPNVT-----IGPDVVIEDGVCIKRS 298
            .||.:...|..|.                   ||.||.||.||.     |..:|.||||..|:.:
plant   334 DVVQSRSADVGASTVIGYGTKIGHGDKIMNSVIGNGCSIGSNVVIEGSYIWNNVTIEDGCEIRNA 398

  Fly   299 TILKGAIVRSHSWLD-SCIVGWRSTVGR 325
            .:..|..:|:.:.|. ..::.:...|||
plant   399 IVCDGVKIRAGAVLQPGVVLSFNVVVGR 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmppbNP_649498.1 M1P_guanylylT_B_like_N 12..242 CDD:133047 59/268 (22%)
LbetaH 264..343 CDD:469633 23/87 (26%)
AT2G34970NP_181042.1 eIF-2B_epsilon_N 25..246 CDD:133040 57/236 (24%)
LbH_eIF2B_epsilon 348..426 CDD:100061 19/77 (25%)
W2_eIF2B_epsilon 550..714 CDD:211396
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.