DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1129 and APL4

DIOPT Version :9

Sequence 1:NP_001189177.2 Gene:CG1129 / 40599 FlyBaseID:FBgn0037279 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_001031391.1 Gene:APL4 / 816697 AraportID:AT2G21590 Length:523 Species:Arabidopsis thaliana


Alignment Length:384 Identity:82/384 - (21%)
Similarity:140/384 - (36%) Gaps:92/384 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ALILVGGYGTRLRPLTLSTPKPLVEFANKPILLH-QLEALVDAGCRQVILAVSYRAEQMEKELKV 76
            |:||.||.|.:|.|||:....|.|.......|:. .:...:::...::.:...:.:..:.:.|..
plant    93 AIILGGGNGAKLFPLTMRAATPAVPVGGCYRLIDIPMSNCINSCINKIFVLTQFNSASLNRHLAR 157

  Fly    77 EAKKLG-------VELIFSHETEPLGTAGPLALAKTILAA-------------SSEPFFVLNSDV 121
            .....|       ||::.:.:|.  |.||......|..|.             :.|...:|:.|.
plant   158 TYFGNGINFGGGFVEVLAATQTP--GEAGKKWFQGTADAVRKFLWVFEDAKNRNIENILILSGDH 220

  Fly   122 ICDFPFKQLVQFHCNHGKEGTIVVTKVEE--PSKYGVVLYDENGCIKNFIEKP------------ 172
            :....:...||.|.:...:.|:....|.|  .|.:|:|..|..|.:.:|.|||            
plant   221 LYRMNYMDFVQSHVDSNADITLSCAPVSESRASNFGLVKIDRGGRVIHFSEKPTGVDLKSMQTDT 285

  Fly   173 -------QEFVSNKINA--GIYIFNPSVLDRIEVK--PTSIE--KEVFPEMTQQQELYAMDLTGF 224
                   ||...:...|  |:|.|....|..:..:  |:|.:  .||.|...:..::.......:
plant   286 TMLGLSHQEATDSPYIASMGVYCFKTEALLNLLTRQYPSSNDFGSEVIPAAIRDHDVQGYIFRDY 350

  Fly   225 WMDIGQPKDFLTGMCLYLSSLR-QKQSPK---------LYTGPGVVGNVLVDPTAKIGEGCRIGP 279
            |.|||..|.|      |.::|. .::.||         .||.|..:      |..| .|.||:  
plant   351 WEDIGTIKTF------YEANLALVEERPKFEFYDPETPFYTSPRFL------PPTK-AEKCRM-- 400

  Fly   280 NVTIGPDVVIEDGVCIKRSTILKGAIVRSHSWLDSCIVGWRSTVGRWVRIEGITVLGED 338
                 .|.:|..|..::..::.:.            |:|.||.:...|.::...:||.|
plant   401 -----VDSIISHGCFLRECSVQRS------------IIGERSRLDYGVELQDTLMLGAD 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1129NP_001189177.2 GCD1 12..361 CDD:224129 82/384 (21%)
M1P_guanylylT_B_like_N 12..242 CDD:133047 59/276 (21%)
LbetaH 264..343 CDD:294107 16/75 (21%)
APL4NP_001031391.1 PLN02241 88..523 CDD:215133 82/384 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D806744at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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