DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1129 and Gmppa

DIOPT Version :9

Sequence 1:NP_001189177.2 Gene:CG1129 / 40599 FlyBaseID:FBgn0037279 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_001344100.1 Gene:Gmppa / 69080 MGIID:1916330 Length:425 Species:Mus musculus


Alignment Length:424 Identity:133/424 - (31%)
Similarity:203/424 - (47%) Gaps:67/424 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RALILVGG--YGTRLRPLTLSTPKPLVEFANKPILLHQLEALVDA-GCRQVILAVSYRA-EQMEK 72
            :|:||:||  .|||.|||:...||||...|..|::.|.:||.... |.::::|...|:. |.:.:
Mouse     3 KAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEALTQ 67

  Fly    73 ELKVEAKKLGVELIFSHETEPLGTAGPL-ALAKTILAASSEPFFVLNSDVICDFPFKQLVQFHCN 136
            .|:...::..:.:.:..|..||||.|.| .....|||.:.|.|||||:||..|||...:::.|..
Mouse    68 FLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGAPEAFFVLNADVCSDFPLSAMLEAHRR 132

  Fly   137 HGKEGTIVVTKVE--EPSKYGVVLYD-ENGCIKNFIEKPQEFVSNKINAGIYIFNPSVLDRI--- 195
            ......::.|...  :...||.::.: :...:.:::|||..|:|:.||.|||:|:|..|..:   
Mouse   133 QRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKPSTFISDIINCGIYLFSPEALKPLRDV 197

  Fly   196 ---------------EVKPTS--------IEKEVFPEMTQQQELYAMDLTGFWMDIGQPKDFLTG 237
                           |..|.|        :|::||..:..|.::|.....|.|..|......|..
Mouse   198 FQRNQQDGQLCLALGEESPGSWPGAGTIRLEQDVFSALAGQGQIYVHLTDGIWSQIKSAGSALYA 262

  Fly   238 MCLYLSSLRQKQSPKL--YT--GPGVVGNVLVDPTAKIGEGCRIGPNVTIGPDVVIEDGVCIKRS 298
            ..|||...:.....:|  :|  ||.:.|||.:.||||:.....:||||:||..|.|.:||.::.|
Mouse   263 SRLYLGRYQITHPERLARHTPGGPRIRGNVYIHPTAKVAPSAVLGPNVSIGKGVTIGEGVRLRES 327

  Fly   299 TILKGAIVRSHSWLDSCIVGWRSTVGRWVRIEG----------------------------ITVL 335
            .:|.||.::.|:.:...||||.||||||.|:||                            ||:|
Mouse   328 IVLHGATLQEHTCVLHSIVGWGSTVGRWARVEGTPNDPNPNDPRARMDSESLFKDGKLLPAITIL 392

  Fly   336 GEDVIVKDELYINGGQVLPHKSIAASVPEPQIIM 369
            |..|.:..|:.|....|||||.::.|... |||:
Mouse   393 GCRVRIPAEVLILNSIVLPHKELSRSFTN-QIIL 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1129NP_001189177.2 GCD1 12..361 CDD:224129 129/414 (31%)
M1P_guanylylT_B_like_N 12..242 CDD:133047 76/263 (29%)
LbetaH 264..343 CDD:294107 37/106 (35%)
GmppaNP_001344100.1 M1P_guanylylT_A_like_N 4..266 CDD:133050 75/261 (29%)
LbetaH 294..360 CDD:412191 30/65 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000664
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.