DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmppb and eif2b5

DIOPT Version :10

Sequence 1:NP_649498.1 Gene:Gmppb / 40599 FlyBaseID:FBgn0037279 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_001107069.1 Gene:eif2b5 / 563613 ZFINID:ZDB-GENE-030131-5364 Length:703 Species:Danio rerio


Alignment Length:445 Identity:87/445 - (19%)
Similarity:163/445 - (36%) Gaps:112/445 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RALILVGGYGTRLRPLTLSTPKPLVEFANKPILLHQLEALVDAGCRQVILAVSYRAEQMEKELKV 76
            :|:::...:..|..|:|...|:.|:..||..::.:.||.|...|.::..:...:.:.::::.| :
Zfish    26 QAVLVADSFNRRFFPITKDQPRALLPLANVSMIDYTLEFLTSTGVQETFVFCCWMSSKIKEHL-L 89

  Fly    77 EAKKLG------VELIFSHETEPLGTAGPLALAKTILAASSEPFFVLNSDVICDFPFKQLVQFHC 135
            ::|...      |.:|.|.....||.......||:::.:.   |.::..||:.:....|.:|.|.
Zfish    90 KSKWCRPTSPNVVHIITSDLYRSLGDVLRDVDAKSLVRSD---FLLVYGDVVSNVDVSQALQEHR 151

  Fly   136 NHGK--EGTIVVTKVEEPSKYG----------VVLYDENGCIKNFIEKPQEFVSNKINAGIYIFN 188
            ...|  :...|:|.:.:.|..|          ::..|...  |..:...:.....::...:.||:
Zfish   152 QRRKMEKNVSVMTMIFKESSPGHKTRCEEEDMIMAIDSKS--KRILHYQRAQALKRLQFPMNIFH 214

  Fly   189 PSVLDRIEVKPTSIEKEVFPEMTQQQELYAMDLTGFWMDIGQPKDFLTG---------------- 237
             |..|..|::...::..:.....|..||:..:     .|.....||:.|                
Zfish   215 -SASDEFEIRFDLLDCHISICSPQVAELFTDN-----FDYQTKNDFVRGILVSEEILGNQIHMHV 273

  Fly   238 -----------MCLY--LSS--LRQKQSP--------------------KLYTGPGV-VG----- 261
                       :.:|  :||  :|:...|                    .:|..||| :|     
Zfish   274 TKDGYGARVSNLLMYDTISSDMIRRWIYPITPDANFADQDGQSCTHSRHNVYREPGVSLGHGSQM 338

  Fly   262 --NVLVDPTAKIGEGCR-----IGPNVTIGPDVVIE-----------DGVCIKRSTILKGAIVRS 308
              |||:.....||..|.     ||.|..||.:|.:|           :.|.:|:|.|..|..|:.
Zfish   339 EENVLIGRNTVIGANCSISNTVIGANCVIGDNVTLERAYIWNRVHIANNVKVKQSVICDGVEVKH 403

  Fly   309 HSWL-DSCIVGWRSTVGRWVRIEGITVLG------EDVIVKDELYINGGQVLPHK 356
            ...| :.|::.:...||..:.:...||:.      ||....||...:...|..:|
Zfish   404 GVVLNEQCVLAYNVVVGPDIALPAGTVVSMHHPDEEDDEDDDEFLSDDNDVSHNK 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmppbNP_649498.1 M1P_guanylylT_B_like_N 12..242 CDD:133047 47/276 (17%)
LbetaH 264..343 CDD:469633 25/101 (25%)
eif2b5NP_001107069.1 eIF-2B_epsilon_N 25..239 CDD:133040 40/219 (18%)
LbetaH <302..>370 CDD:469633 17/67 (25%)
LbH_eIF2B_epsilon 343..421 CDD:100061 20/77 (26%)
W2_eIF2B_epsilon 531..693 CDD:211396
Blue background indicates that the domain is not in the aligned region.

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