DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gmppb and eif2b3

DIOPT Version :10

Sequence 1:NP_649498.1 Gene:Gmppb / 40599 FlyBaseID:FBgn0037279 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_957368.1 Gene:eif2b3 / 394049 ZFINID:ZDB-GENE-040426-1039 Length:453 Species:Danio rerio


Alignment Length:444 Identity:100/444 - (22%)
Similarity:178/444 - (40%) Gaps:113/444 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RALILVGGYGTRLRPLTLSTPKPLVEFANKPILLHQLEALVDAGCRQVILAVSYRAEQMEKELKV 76
            :|:::..|.|:|:..||.:|||||:...|||::.:.|..|...|..:||:..:   ::::|.|..
Zfish     4 QAVLMAAGGGSRMMDLTYNTPKPLLPVGNKPLIWYPLNLLERVGFEEVIVITT---KEVQKALST 65

  Fly    77 EAK-----KLGVELIFSHETEPLGTAGPLALAKTILAASSEPFFVLNSDVICDFPFKQLVQFHCN 136
            :.:     |:.::::...|...:|||..|   :.|.........||:.|:|.|....::|.....
Zfish    66 DQRLKTDVKMKLDVVCIQEEADMGTADAL---RHIQQKIKTDILVLSCDLITDVALHEVVDLFRA 127

  Fly   137 HGKEGTIVVTKVEE-----PSKYG---------VVLYD---------------ENGCI--KNFIE 170
            |....:::::||.|     |.:.|         .|..|               |.|.:  |:.:.
Zfish   128 HNATLSMLMSKVHEFTETVPGQKGKKKAGEQRDFVGVDVTGKRLLFMANEADLEEGLVLRKSIMR 192

  Fly   171 K-PQEFV-SNKINAGIYIFNPSVLDRI--EVKPTSIEKEVFPEMT-------------------- 211
            | |:.|: :..::|.:|....||:|.:  ....|||..|:.|.:.                    
Zfish   193 KHPRMFIKTGLLDAHLYCLKRSVVDFLVHNKSVTSIRGELVPYLVRKQFSKSLNSQHVTEDSEKN 257

  Fly   212 -QQQELYA-MDL---------------TGFWMDI----------GQPKDFL----TGMCLYLSSL 245
             :|||.:. |||               ...|.|.          |:.:.::    .|||..:::|
Zfish   258 QKQQEAHINMDLLSTSKDEALLQLARERSCWNDHRGDMSEAYHGGKIRCYVHIMEDGMCYRVNTL 322

  Fly   246 -----RQKQSPKLYTGPGVVGNVLVDPTAKIGEGCRIGPNVTIGPDVVIEDGVCIKRSTILKGAI 305
                 ..:..|||:..|.      :.|||.:.|...:|.:..|||...|.|...||||.:....:
Zfish   323 AAYIEANRVVPKLFEEPP------IHPTAVVSERSLVGSDSIIGPSCQISDKTSIKRSNVGTSTV 381

  Fly   306 VRSHSWLDSCIVGWRSTVGRWVRIEGI-----TVLGEDVIVKDELYINGGQVLP 354
            ::....:.:.|:....|:.....|:|.     .|:|....:|..|..:|.:|.|
Zfish   382 IKEKVKITNSIIMNGVTIEEGCNIQGSVICSHAVIGRGADIKYCLVGSGQRVDP 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmppbNP_649498.1 M1P_guanylylT_B_like_N 12..242 CDD:133047 70/320 (22%)
LbetaH 264..343 CDD:469633 20/83 (24%)
eif2b3NP_957368.1 eIF-2B_gamma_N 3..216 CDD:133041 51/217 (24%)
LbH_eIF2B_gamma_C 358..438 CDD:100057 20/78 (26%)

Return to query results.
Submit another query.