DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gmppb and gmppab

DIOPT Version :10

Sequence 1:NP_649498.1 Gene:Gmppb / 40599 FlyBaseID:FBgn0037279 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_956791.1 Gene:gmppab / 393469 ZFINID:ZDB-GENE-040426-1550 Length:422 Species:Danio rerio


Alignment Length:426 Identity:129/426 - (30%)
Similarity:205/426 - (48%) Gaps:74/426 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RALILVGG--YGTRLRPLTLSTPKPLVEFANKPILLHQLEALVDAGCRQV-----ILAVSYRA-- 67
            :|:||:||  .|||.|||:...||||...|..|:|.|.:||     |.||     |:.:.:..  
Zfish     3 KAIILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMLQHHIEA-----CAQVPDMKEIMLIGFYQPN 62

  Fly    68 EQMEKELKVEAKKLGVELIFSHETEPLGTAGPL-ALAKTILAASSEPFFVLNSDVICDFPFKQLV 131
            :::.:.:....::..:.:.:..|...|||.|.: .....||:.....||::|:||..:||..:::
Zfish    63 DELNRFIYSAQQEFKIPIRYLQEFAALGTGGGIYHFRDQILSGGPAAFFLMNADVCSEFPLLEML 127

  Fly   132 QFHCNHGKE--GTIVVTKVE--EPSKYGVVLYD-ENGCIKNFIEKPQEFVSNKINAGIYIFNPSV 191
            |||..||:.  |.::.|...  :...||.::.: |...:.:|:|||..|||:.||.|||:|.|.:
Zfish   128 QFHRQHGENHCGVLLGTTANRTQSLNYGCIVENHETNEVLHFVEKPSTFVSDIINCGIYLFTPDI 192

  Fly   192 L------------DRIEVKPT---------SIEKEVFPEMTQQQELYAMDLTGFWMDIGQPKDFL 235
            .            ::|:.:.|         .:|:::|..:..|::|:......||..|......:
Zfish   193 FAHIGKVFQRNQQEKIQEELTHGRQMPEVVRLEQDIFTALAGQKKLFVYKTQHFWSQIKSAGSAI 257

  Fly   236 TGMCLYLSSLRQKQSPKLYTG----PGVVGNVLVDPTAKIGEGCRIGPNVTIGPDVVIEDGVCIK 296
            ....|||....|....:|.|.    |.:.|:|.:.|||.|.....:||||:||..|.|..||.::
Zfish   258 YASRLYLKQYHQTHPERLATNQGGTPKITGDVYIHPTANIDPSAVLGPNVSIGKGVTIGGGVRVR 322

  Fly   297 RSTILKGAIVRSHSWLDSCIVGWRSTVGRWVRIEG----------------------------IT 333
            .|.||.||:::.|..:.:.||||.||||:|.|:||                            ||
Zfish   323 ESIILHGAVLQDHCCVLNSIVGWDSTVGKWARVEGTPSDPNPNDPYAKIDSETLFRDGGLTPSIT 387

  Fly   334 VLGEDVIVKDELYINGGQVLPHKSIAASVPEPQIIM 369
            :||.:|.:..|:.|....|||||.:..|. :.|||:
Zfish   388 ILGCNVNIPSEVIIRNSIVLPHKDLNRSF-KNQIIL 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmppbNP_649498.1 M1P_guanylylT_B_like_N 12..242 CDD:133047 73/265 (28%)
LbetaH 264..343 CDD:469633 37/106 (35%)
gmppabNP_956791.1 Substrate-binding domain. /evidence=ECO:0000250|UniProtKB:Q96IJ6 2..253 72/254 (28%)
M1P_guanylylT_A_like_N 4..263 CDD:133050 72/263 (27%)
Hexapeptide repeat domain. /evidence=ECO:0000250|UniProtKB:Q96IJ6 275..422 52/147 (35%)
LbetaH 291..357 CDD:469633 30/65 (46%)
C-loop. /evidence=ECO:0000250|UniProtKB:Q96IJ6 358..386 0/27 (0%)

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