DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gmppb and Y47D9A.1

DIOPT Version :10

Sequence 1:NP_649498.1 Gene:Gmppb / 40599 FlyBaseID:FBgn0037279 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_491349.1 Gene:Y47D9A.1 / 172033 WormBaseID:WBGene00021628 Length:401 Species:Caenorhabditis elegans


Alignment Length:400 Identity:123/400 - (30%)
Similarity:201/400 - (50%) Gaps:44/400 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RALILVGG--YGTRLRPLTLSTPKPLVEFANKPILLHQLEALVD-AGCRQVILAVSYRAEQMEKE 73
            :|::||||  .|||.|||:|..||||...|..|::.|.::.|.. :|..:::|...:.::.....
 Worm     4 KAVVLVGGPQKGTRFRPLSLQLPKPLFPIAGVPLIEHHIDQLCQLSGLSEILLLGFFPSDVFTDF 68

  Fly    74 LKVEAKKLGVELIFSHETEPLGTAGPL-ALAKTILAASSEPFFVLNSDVICDFPFKQL-VQFHCN 136
            :....:...|.:.:..|..||||||.| :..|.|||...:..||:|:||..|.|.:.: .:....
 Worm    69 ISRCQQTYRVSIKYLEEPNPLGTAGGLVSFKKQILAGDPDAVFVINADVCGDLPIEDMGAKLDSL 133

  Fly   137 HGKEGTIVVTKV--EEPSKYGVVLYDENGCIKNFIEKPQEFVSNKINAGIYIFNPSVLDRIEVKP 199
            .|....::.|:.  ::...:|.|:.|..|.:.::::||..|||..|:.|:|:....|:.:::: |
 Worm   134 SGSSMLMLTTEATRQQSINFGSVVTDSEGRVIHYVDKPTTFVSTNISCGVYLIKAEVIRQLDL-P 197

  Fly   200 TS-----IEKEVFPEMTQQQELYAMDLTGFWMDIGQPKDFLTGMCLYLSSLRQKQSPKL-YTGPG 258
            .:     :|.:|.|::.....|||:..|.:|.........|.....||...:::.:.:| ..|..
 Worm   198 LNGDGIWLETDVLPQLASSGNLYALHTTRWWSQTKTAAAVLYANRHYLRLYKRRYAARLCKNGAQ 262

  Fly   259 VVGNVLVDPTAKIGEGCRIGPNVTIGPDVVIEDGVCIKRSTILKGAIVRSHSWLDSCIVGWRSTV 323
            ::|:|.:||:||:....:|||||:|||..||..||.||.|.||..|::..::.:...::||||.|
 Worm   263 IIGDVFIDPSAKVHPTAKIGPNVSIGPKSVIGKGVRIKESIILPEAVIEENACVLQSVIGWRSVV 327

  Fly   324 GRWVRIEGI-----------------------------TVLGEDVIVKDELYINGGQVLPHKSIA 359
            |.|.|||||                             |:||.||.|..|..|....|||:|.:.
 Worm   328 GMWARIEGIPLEPNPNLPFAKMDNKPLFLPDGRLTPSLTILGSDVSVAPETIILNCVVLPYKELT 392

  Fly   360 ASVPEPQIIM 369
            .|. :.|||:
 Worm   393 CSY-KNQIIL 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GmppbNP_649498.1 M1P_guanylylT_B_like_N 12..242 CDD:133047 67/241 (28%)
LbetaH 264..343 CDD:469633 40/107 (37%)
Y47D9A.1NP_491349.1 M1P_guanylylT_A_like_N 5..244 CDD:133050 67/239 (28%)
LbetaH 269..336 CDD:469633 32/66 (48%)

Return to query results.
Submit another query.