DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ctrip and AREL1

DIOPT Version :9

Sequence 1:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:NP_001034568.1 Gene:AREL1 / 9870 HGNCID:20363 Length:823 Species:Homo sapiens


Alignment Length:1052 Identity:206/1052 - (19%)
Similarity:348/1052 - (33%) Gaps:354/1052 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  2140 PFEVNHSGLIKAMLNYMTSETGLVERDARLR-SFMHVFAGLPLEPLLQNVGQMP--TIEPIAF-- 2199
            |:||.||...:..|.|...:.....|...|| ...||...:.: |:.|.|.|.|  .:..:||  
Human    69 PYEVGHSMAFRVHLFYKNGQPFPAHRPVGLRVHISHVELAVEI-PVTQEVLQEPNSNVVKVAFTV 132

  Fly  2200 ---GAF--VAKLNGCVTQLEQFPVKVHDFPAGPGGRSNQSALRFFNTHQLKC----NLQRHPQ-- 2253
               |.:  ..||.|.......: .|:  |..|....|....:..|:|..|.|    .||..|:  
Human   133 RKAGRYEITVKLGGLNVAYSPY-YKI--FQPGMVVPSKTKIVCHFSTLVLTCGQPHTLQIVPRDE 194

  Fly  2254 ----CNN---LRQWKGGTVKIDPLAMVQAIERYLVVRGYGGIRADSDDDSEEDMDDNVA---AVV 2308
                .||   ||.....|:.|..|.                        .:|:....|:   :|.
Human   195 YDNPTNNSMSLRDEHNYTLSIHELG------------------------PQEEESTGVSFEKSVT 235

  Fly  2309 LSQASFRHKLQFTIGDHVLPYNMTVYQAVKQFSPLVSEQPETDNESETLLGNASIWVQQHTIHYR 2373
            .::.:|:..|:.|:......:....||          .||..:.|.:.::    :...:..|   
Human   236 SNRQTFQVFLRLTLHSRGCFHACISYQ----------NQPINNGEFDIIV----LSEDEKNI--- 283

  Fly  2374 PVEEEV-TSGAA---AGAASSSSSCSS-----GVQKQQSSSSSASSCVNATSSCSSSSGVASGGG 2429
             ||..| |||.:   .....::::|||     ......||....|:.|:.....|.|        
Human   284 -VERNVSTSGVSIYFEAYLYNATNCSSTPWHLPPMHMTSSQRRPSTAVDEEDEDSPS-------- 339

  Fly  2430 SLTKKAHKSSSKFMRKKTELWHEGIAPVVISALKPFLSSSLPADVVTVQDASLDALCMLRVIHAL 2494
                :.|........||...:   ::|...| :|.|....:|..:.|.:                
Human   340 ----ECHTPEKVKKPKKVYCY---VSPKQFS-VKEFYLKIIPWRLYTFR---------------- 380

  Fly  2495 NRHWDHLYGCVVRQNIIPQSDF-------IHPKIMAKANRQLQDPLVIMTGNLPQWLPQIGMACP 2552
                           :.|.:.|       :|..:....:..:|              |.:.::| 
Human   381 ---------------VCPGTKFSYLGPDPVHKLLTLVVDDGIQ--------------PPVELSC- 415

  Fly  2553 FLFPFETRHLLFYATSFDRDRALQRLLDTTPDLNAAESSERVAPRLDRRKRAISRTEILKQAEHI 2617
                 :.|::|  |.:|  .|:|.:      ::..:|:.:.......|..|.:          |:
Human   416 -----KERNIL--AATF--IRSLHK------NIGGSETFQDKVNFFQRELRQV----------HM 455

  Fly  2618 LQDFGHSKALLEIQYENEVGTGLGPTLEFYALVSAELQRTDLGLWNGSDSYKQNSVTIVDVVKAN 2682
            .:.  |||..|::..              :||:.:.|:.|             .:.:|.|..|..
Human   456 KRP--HSKVTLKVSR--------------HALLESSLKAT-------------RNFSISDWSKNF 491

  Fly  2683 SAVLHIEDALEATTTDQNTPAVAGASLVSSSTTTTTTTAQQHQHPPTRSSSRSHVLRSGAGQQPV 2747
            ..|...|:||     |...|......|:..:...||..                           
Human   492 EVVFQDEEAL-----DWGGPRREWFELICKALFDTTNQ--------------------------- 524

  Fly  2748 EHSSSSAGANENALNMVIAQQFSDTNSA--NPAAIDNPSSTTTATTVVQHNTTTNNSSIITTTTT 2810
                             :..:|||.|.|  :|    ||                 |.........
Human   525 -----------------LFTRFSDNNQALVHP----NP-----------------NRPAHLRLKM 551

  Fly  2811 TSYVHAVHG--LFPLPLGKSSKLPQMTKAKAKFKFLGKFMAKAVMDSRMLDLPFSLPFYRWLVSE 2873
            ..:...:.|  |:...||.:.|  |:.:|    :|...|:|: ::..||        .|::..::
Human   552 YEFAGRLVGKCLYESSLGGAYK--QLVRA----RFTRSFLAQ-IIGLRM--------HYKYFETD 601

  Fly  2874 EHSIGLADLMRVAPEVQNTLV--RLQDLVRQREYILSDPNIDAMEKTEKIEQLDLDGCPIADLGL 2936
            :            ||...:.|  .|.:.:.:.|.:.::      ||..|..|||           
Human   602 D------------PEFYKSKVCFILNNDMSEMELVFAE------EKYNKSGQLD----------- 637

  Fly  2937 DFVLPGHANIELCRGGRDTPVTVHNLHQYISLVTYWFLIEGVQKQFEALREGFDSVFPIQRLRMF 3001
                   ..:||..||..||||..|...|::|:..:.|...|:::.|...:|.:.:.|...|.:|
Human   638 -------KVVELMTGGAQTPVTNANKIFYLNLLAQYRLASQVKEEVEHFLKGLNELVPENLLAIF 695

  Fly  3002 YPEELECVFCGSGSEQQHSRWEIKMLQESCRTDH------GFHQDSQAIQYLYEILASYNRDEQR 3060
            ...|||.:.||:|.           :..|....|      .:|...:.:::.:.:::|..::|..
Human   696 DENELELLMCGTGD-----------ISVSDFKAHAVVVGGSWHFREKVMRWFWTVVSSLTQEELA 749

  Fly  3061 AFLQFVTGSPRLPTGGFKALTPPLTIVRKTLDENQNPNDYLPSVMTCVNYLKLPDYSSREVMRQK 3125
            ..|||.|||.:||.|||.||.|...|:...      .:..||:..||.|.|.||.|.|.|.:.:.
Human   750 RLLQFTTGSSQLPPGGFAALCPSFQIIAAP------THSTLPTAHTCFNQLCLPTYDSYEEVHRM 808

  Fly  3126 LKVAANEGSMSF 3137
            |::|.:||...|
Human   809 LQLAISEGCEGF 820

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669
WWE 1409..1481 CDD:128922
FAM199X <1985..2074 CDD:292442
HECTc <2818..3138 CDD:294058 84/330 (25%)
AREL1NP_001034568.1 Filamin 52..158 24/92 (26%)
Filamin 56..154 CDD:395505 23/85 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 315..345 7/41 (17%)
Interaction with SOCS2. /evidence=ECO:0000269|PubMed:31578312 483..789 91/443 (21%)
HECTc 486..820 CDD:214523 103/471 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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