DRSC/TRiP Functional Genomics Resources

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Protein Alignment ctrip and Hectd3

DIOPT Version :9

Sequence 1:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:NP_780453.1 Gene:Hectd3 / 76608 MGIID:1923858 Length:861 Species:Mus musculus


Alignment Length:295 Identity:81/295 - (27%)
Similarity:127/295 - (43%) Gaps:47/295 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  2839 AKFKFLGKFMAKAVMDSRMLDLPFSLPFYRW--LVSEEHSIGLADLMRVAPEVQNTLVRLQDLVR 2901
            ||::::|:.|..|:.....|.|  :||.:.|  |..||.|     ..:..|.|.:.||:|     
Mouse   596 AKYEWIGQLMGAALRGKEFLVL--ALPGFVWKQLSGEEVS-----WSKDFPAVDSVLVKL----- 648

  Fly  2902 QREYILSDPNIDAMEKTEKIEQLDLD-GCPIADLGLDFVLPGHANIELCRGGRDTPVTVHNLHQY 2965
                      ::.||..:| |..:.. |   .:|....||.....:||..||....|...:..::
Mouse   649 ----------LEVMEGVDK-ETFEFKFG---KELTFTTVLSDQQVVELIPGGTGIVVEYEDRSRF 699

  Fly  2966 ISLVTYWFLIEGVQKQFEALREGFDSVFPIQRLRMFYPEELECVFCGSGSEQQHSRWEIKMLQES 3030
            |.||....|.|. ::|..|::.|...|.|...|.:...:|||...||.      ....:..|::.
Mouse   700 IQLVRKARLEES-KEQVAAMQAGLLKVVPQAVLDLLTWQELEKKVCGD------PEVTVDALRKL 757

  Fly  3031 CRTDHGFHQDSQAIQYLYEILASYNRDEQRAFLQFVTGSPRLPTGGFKALTPPLTIVRKTLDENQ 3095
            .|.: .|......:||.:|.|.::..:::..||:||||..|||.   :....|..:..:|     
Mouse   758 TRFE-DFEPSDTRVQYFWEALNNFTNEDRSRFLRFVTGRSRLPA---RIYIYPDKLGYET----- 813

  Fly  3096 NPNDYLPSVMTCVNYLKLPDYSSREVMRQKLKVAA 3130
              .|.||...||.:.|.||.|:|.:|..:||:.||
Mouse   814 --TDALPESSTCSSTLFLPHYASAKVCEEKLRYAA 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669
WWE 1409..1481 CDD:128922
FAM199X <1985..2074 CDD:292442
HECTc <2818..3138 CDD:294058 81/295 (27%)
Hectd3NP_780453.1 APC10-HECTD3 238..371 CDD:176487
HECTc 528..849 CDD:214523 81/295 (27%)
HECT 586..845 CDD:279026 79/292 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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