| Sequence 1: | NP_001189170.1 | Gene: | ctrip / 40596 | FlyBaseID: | FBgn0260794 | Length: | 3140 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_084390.1 | Gene: | Herc4 / 67345 | MGIID: | 1914595 | Length: | 1057 | Species: | Mus musculus |
| Alignment Length: | 869 | Identity: | 167/869 - (19%) |
|---|---|---|---|
| Similarity: | 296/869 - (34%) | Gaps: | 219/869 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2366 QQHTIHYRPVEEEVTSGAAAGAASSSSSCSSGVQKQQSSSSSASSCVNATSSCSSSSG------- 2423
Fly 2424 --VASGGGSLTKKAHKSSS---------KFMRKKTELWHEGIAPVVISALKPFLSSSLPADVVTV 2477
Fly 2478 QDASLDAL-CMLRVIHALNRHWDHLYGCVVRQNIIP------------QSDFIHPKIMAKANRQL 2529
Fly 2530 QDPLV-IMTGNLPQ--------WLPQIGMACPFLFP---FETRHLLFYATSFDRDRALQRLLDT- 2581
Fly 2582 ----TPD--LNAAESSERVAPRLDRRKRAISRTEILKQAEHILQDFGHSKALLEIQYENEVGTGL 2640
Fly 2641 GPTLEFYALVSAELQ-----RTDLGLWNGSDSY---KQNSVT-IVDVVKANSAVLHIEDALEATT 2696
Fly 2697 TDQNTPAVAGASLVSSSTTTTTTTAQQHQHPPTRSSSRSHVLRSGAGQQPVEHSSSSAGANENAL 2761
Fly 2762 NMVIAQQFSDTNSANPAAIDNPSSTTTATTVVQHNTTTNNSSIITTTTTTSY------------- 2813
Fly 2814 ------------------VHAVHGLFPLPLGKSSKL----PQMTKAKAKFKFLGKFMAKAVMDSR 2856
Fly 2857 MLDLPFSLPFYRWLVSEEHSIGLADLMRVAPEVQNTLVRLQDLVRQREYILSDPNIDAMEKTEKI 2921
Fly 2922 EQLDLDGCPIADLGLDFVLP----GHANI-ELCRGGRDTPVTVHNLHQYISLVTYWFLIEGVQKQ 2981
Fly 2982 FEALREGFDSVFPIQRLRMFYPEELECVFCGSGSEQQHSRWEIKMLQESCRTDHGFHQDSQAIQY 3046
Fly 3047 LYEILASYNRDEQRAFLQFVTGSPRLPTGGFKALTPPLTIVRKTLDENQNPNDYLPSVMTCVNYL 3111
Fly 3112 KLPDYSSREVMRQKL--KVAANEG 3133 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| ctrip | NP_001189170.1 | Extensin_2 | <688..731 | CDD:252669 | |
| WWE | 1409..1481 | CDD:128922 | |||
| FAM199X | <1985..2074 | CDD:292442 | |||
| HECTc | <2818..3138 | CDD:294058 | 79/327 (24%) | ||
| Herc4 | NP_084390.1 | RCC1 1 | 1..51 | ||
| RCC1 | 3..49 | CDD:278826 | |||
| RCC1 2 | 52..101 | ||||
| RCC1 | 52..99 | CDD:278826 | |||
| RCC1 3 | 102..154 | ||||
| RCC1 | 102..152 | CDD:278826 | |||
| RCC1 4 | 156..207 | ||||
| RCC1 | 157..205 | CDD:278826 | |||
| RCC1 5 | 208..259 | ||||
| RCC1 | 208..257 | CDD:278826 | |||
| RCC1 | 260..308 | CDD:278826 | 3/4 (75%) | ||
| RCC1 6 | 261..311 | 3/7 (43%) | |||
| RCC1 7 | 313..366 | 6/55 (11%) | |||
| RCC1 | 313..>343 | CDD:278826 | 4/32 (13%) | ||
| HECTc | 709..1055 | CDD:238033 | 84/397 (21%) | ||
| HECTc | 735..1054 | CDD:214523 | 79/362 (22%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||