DRSC/TRiP Functional Genomics Resources

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Protein Alignment ctrip and wwtr1

DIOPT Version :9

Sequence 1:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:NP_001032785.1 Gene:wwtr1 / 568008 ZFINID:ZDB-GENE-051101-1 Length:391 Species:Danio rerio


Alignment Length:409 Identity:90/409 - (22%)
Similarity:137/409 - (33%) Gaps:116/409 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   622 PPQLLPTHQFAHLSSFVTPTAAAAAAAAAAHYPPAS-----AAAAYFAQQQHHQHQHQHQQQHVQ 681
            |.|.:|.||..|::..: .|...|...:..:..|:|     ...::|.:.....|..|       
Zfish     5 PLQPIPGHQVIHVAKDL-DTDLEALFNSVMNPKPSSWRNKDMPQSFFQEPDSGSHSRQ------- 61

  Fly   682 QAQAPQPHYYHSSVAVLHQPPPHHFTSTGAGPPPALFQQQA-------PPQLTRYTPATATTAAT 739
                       ||......||..||.|..:   ||..|..|       |.:|..:|...:...|.
Zfish    62 -----------SSADSGSLPPRVHFRSRSS---PASLQLPAGSVSGPSPGRLHSHTRHQSCDVAE 112

  Fly   740 FVP-PQQQQVVYNPQQQQH--SSLRRSSRGKTGSCVSSAAAAQQQQHHQQQQHSSAAAAVQQQ-- 799
            .:| |...::.:.|..|::  :.:.:.:.........:.:.||...|:|    .|..|::||:  
Zfish   113 ELPLPPGWEMAFTPNGQKYFLNHIEKITTWHDPRKSMTPSVAQLSLHNQ----VSNTASIQQRSM 173

  Fly   800 LLPPPGTYQYQQVGGNTVVVAVRHQQQLQQQQQQQQQLALH--HQHQQQQHQQQQQQHQQQQHQQ 862
            .|..|.....||.          ||||.|..||||||:.:.  .|..|||..|.......|||||
Zfish   174 ALSQPNLVLNQQA----------HQQQQQHLQQQQQQVPVQVPVQAPQQQSSQPMMNLSAQQHQQ 228

  Fly   863 QQRATLVQPGFLFSYRSNQPQQQQQPAQQIHQGPKVTHSSAASDALTYSLMAQQPPSGPPHAGGQ 927
            :.|...:|    ......|.:|::...|::                   .:.|.|          
Zfish   229 KMRLQRIQ----MERERIQRRQEELMRQEV-------------------ALRQLP---------- 260

  Fly   928 QITPGANSANLSIVAAALSAARDVGGGSDGGGSAGGATPATGASASSVGNTSAVGASSSSNSSAG 992
                 .:|.||..||                       ||.|:.|.|.||.....|....||...
Zfish   261 -----MDSDNLPPVA-----------------------PAIGSPAMSAGNMPNNSADPFLNSGPY 297

  Fly   993 QAASSNSNNVTATGSGSAP 1011
            .:...::::....|..|.|
Zfish   298 HSREQSTDSGLGLGCYSIP 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669 13/49 (27%)
WWE 1409..1481 CDD:128922
FAM199X <1985..2074 CDD:292442
HECTc <2818..3138 CDD:294058
wwtr1NP_001032785.1 WW 115..146 CDD:197736 4/30 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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