DRSC/TRiP Functional Genomics Resources

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Protein Alignment ctrip and plekha5

DIOPT Version :9

Sequence 1:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:XP_021330752.1 Gene:plekha5 / 567300 ZFINID:ZDB-GENE-041210-25 Length:1398 Species:Danio rerio


Alignment Length:1237 Identity:212/1237 - (17%)
Similarity:367/1237 - (29%) Gaps:382/1237 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 EKRNAPATSGPAVSSSVDVVPATSTASATSTRRSRSQGRHSSAAALSSKESQIPKRSVGAIRSPS 131
            ||:..|.::....|:.......|:..|:.:||.|||          |.|.....|||....|:|:
Zfish   126 EKKERPTSTMSEASNYTGGSDYTTHPSSPTTRPSRS----------SKKVHNFGKRSNSIKRNPN 180

  Fly   132 SPAFNSIPVVSDQSLSPGSRKRQLNQHNNSNNKASSSHQSAPGGDQLVCAPLKKRRLQQSLGSGI 196
            :|..               :...|::.:::..|.                 .|||..   :.|.:
Zfish   181 APVI---------------KNGWLHKQDSTGMKM-----------------WKKRWF---VLSDM 210

  Fly   197 C---------EGAVEINLGAASFDHTPRQASGDCVAQRTRSKTISPEELPSTSSAAAARHHQIRP 252
            |         ||.:                 |..:........:|.::..:...|..|.|..:|.
Zfish   211 CLFYYRDEKEEGIL-----------------GSILLPSFHISMLSVDDHITRKYAFKATHPNMRT 258

  Fly   253 SASSTSFSSSHRNKRKASIGGSIAAVETTPHRGTAAARAG-----RSGNLLNYYRKTRKVSHTRS 312
            ...||..:....:..|.....::|..|  |.|.....:..     ...|:||:...||.     .
Zfish   259 YYFSTDTAKDMESWMKVMSDAAMAHSE--PIRRLEKVKLDSRVPQEMNNMLNHRVLTRP-----E 316

  Fly   313 SQKSEKQSIPAEDTTANRNGSAGSGSSSKSGVIPKNRKSLRHSQQNLLDTEAAEVES--AAAETG 375
            .|.:|                             :||::||...:....:|..:.:.  .:.:..
Zfish   317 IQNNE-----------------------------RNRETLRQEDKKSKPSEKPQKDKDRVSMQKD 352

  Fly   376 GEQQSEHGNLDVIDQLPTPEAGPNQSEASGIHNQSQLEADRQPVVQDEDDEEDDEEEEEEEEEEV 440
            ||:.||                 |.:.......:..|:.|.:..|..:|.|:...::|.::.   
Zfish   353 GERFSE-----------------NYTHRQKDGERYMLQKDLEKFVLQKDGEKYAVQKEGDKY--- 397

  Fly   441 GFYGIVNSAGSSYEEDTQIVAEEDEITTEEEVD----DEDDDEIEEEDL---------------- 485
                ::...|..|    .:..:.|:.|.:.|::    .:|.::|.::|.                
Zfish   398 ----LLQKDGHKY----TVHKDGDKYTLQRELEMYNPPKDAEKIPQKDARFSLVQKELEKPVPPP 454

  Fly   486 -SESEFAQQLIGELGGERQQPQRATNNAKKTKNNTPAVAAA-STIKATTTATTSSGYQQRAAPHG 548
             ||.::..|..|.:    ::|....|:.|.......|:||| |:.:........||  :||....
Zfish   455 RSEEKYGFQKEGTI----ERPLTKINSIKLQPAQAAAIAAAVSSSRMMQKQVNGSG--ERAGDRS 513

  Fly   549 QG-------AAPGAGGGGPRATRSSNSNSSNNVVDYSIMPHLTTVATTTPHALTPQQ-------- 598
            .|       :.|......|...||.:..||...::..:..|.|........::|..|        
Zfish   514 PGDLSTVRTSVPPPTQPAPEPERSLSRTSSMQQLEQWVRTHRTRAPDDDTRSITSYQTLPRNMPS 578

  Fly   599 HQQQRQPPQPPSH-----------------------------------------------QQQQV 616
            |:.|..|..|..:                                               ||:|.
Zfish   579 HRAQIVPRYPEGYRTLPRNMLRPDSICSVAGSVYDRALQPSTQEKRRSIRDDTMWQLYEWQQRQA 643

  Fly   617 HQQ------------QQPPQLLPT----------HQFA--------------------------- 632
            |.:            .|..:.:||          |.|:                           
Zfish   644 HSRLGYGTLPSPKTMGQIAESIPTSPSHGSLAGYHTFSPNRPLNPDSRSELSSPVFRGDVTIERR 708

  Fly   633 ---HLSSFVTPTAAAAAAAAAAHYPPASAAAAYFAQ----------------QQ---HHQHQHQH 675
               |||.:..|....||       |||....|...|                ||   :...:|..
Zfish   709 HRPHLSKYSYPAERRAA-------PPAQNITAQSLQGKTPEELTLLLIKLRRQQAELNSLREHTL 766

  Fly   676 QQQHVQQAQAPQP------HYYHSSVAVLHQPPPH--------HFTSTGAGPPPALFQQQAPPQL 726
            .|.......|..|      |:...::..|......        |.....:.|.|.|:|||..|:.
Zfish   767 AQLMQLNLDATNPKSEILSHHLQRNLMYLDSQMKENEPIIFMIHTMIENSAPRPQLYQQQMSPEE 831

  Fly   727 TR-----YTPATATTAATFVPPQQQQVVYNPQQQQHSSLRRSSRGKTGSCVSSAAAAQQQQHHQQ 786
            .|     |.|......|......:|..|...|:::...|.|...    :..::..:|.|:.....
Zfish   832 YRENTYMYRPEELDVDAKLSRLCEQDKVVRTQEEKLQQLHREKH----TLETALLSASQEIEMSS 892

  Fly   787 QQHSSAAAAVQQQLLPPPGTYQYQQVGGNTVVVAVRHQQQLQQQQQQQQQL----ALHHQHQQQQ 847
            :..::..:.|||:.:...|..       :|.....|...:|::..::..:|    .|...:..:|
Zfish   893 ENPAAVQSVVQQRDVLQSGLL-------STCRELSRVSTELERSWREYDRLEADVTLAKTNLLEQ 950

  Fly   848 HQ---QQQQQHQQQQHQQQQRATLVQPGFLFSYRSNQPQQQQQPAQQIHQGPKVTHSSAASDALT 909
            .:   ..|.:...|:|.|.|:........:.:...|:|::..:|:..........|.|  .|::.
Zfish   951 LEALGSPQTEPPSQKHVQIQKELWRIQDVMEALSKNKPKRNPEPSFPGANPLSTLHKS--EDSVD 1013

  Fly   910 YSLMAQQPPSGPPHAGGQQITPGANSANLSIVAAALSAARDVGGGSDGGGSAGGATPATGASASS 974
            .|.:..:||....:.||.:..|..|...............| ...:...|:..|.......|...
Zfish  1014 SSCVPPRPPLPYSYEGGDRPPPLPNPGQPHTTRTTPHRPED-RKTAQRNGTHTGPDYRLYKSEPE 1077

  Fly   975 VGNTSAVGASSSSNSSAGQAASSNSNNVTATGSGSAPGGGPTSTGTTSGTQHGSGSGA------- 1032
            :...:.|..|:..:.|. |.|......||   .|.....|..|..|.|.....|...:       
Zfish  1078 LTTVAEVDESNGEDKSE-QTAEKEPPGVT---KGIVYPVGVVSPRTKSPMPESSTIASYVTLRKT 1138

  Fly  1033 --------------AAAVDSESDDSEVGRLQALLEAR--GLPPHLFGALGPRVTHILHRTIGNSS 1081
                          .:||:..|..:||||.:..:|.:  .:..|..|||..|     .|..|:.|
Zfish  1139 KKPDPRTCQPQDRPRSAVEQMSSGAEVGRTRMSVEEQMERIRRHQQGALRER-----RREDGSLS 1198

  Fly  1082 SS 1083
            .|
Zfish  1199 RS 1200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669 13/61 (21%)
WWE 1409..1481 CDD:128922
FAM199X <1985..2074 CDD:292442
HECTc <2818..3138 CDD:294058
plekha5XP_021330752.1 WW 13..42 CDD:306827
WW 58..87 CDD:306827
PH_PEPP1_2_3 177..280 CDD:270068 21/154 (14%)
SMC_N 822..>983 CDD:330553 31/171 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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