DRSC/TRiP Functional Genomics Resources

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Protein Alignment ctrip and herc5.1

DIOPT Version :9

Sequence 1:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:XP_017211386.1 Gene:herc5.1 / 559981 ZFINID:ZDB-GENE-090311-56 Length:884 Species:Danio rerio


Alignment Length:301 Identity:72/301 - (23%)
Similarity:129/301 - (42%) Gaps:54/301 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  2833 QMTKAKAKFKFLGKFMAKAVMDSRMLDLPFSLPFYRWLVSEEHSIGLADLMRVAPEVQNTLVRLQ 2897
            ::|..|.|:...|.....|..:|.:::|||.|..::            .|:.:.|.       |:
Zfish   618 KLTVEKKKYFLFGILCGLAFNNSSVVNLPFPLALFK------------KLLNIKPS-------LE 663

  Fly  2898 DLV-------RQREYILSDPNIDAMEKTEKIEQLDLDGCPIADLGLDFVLPGHANIELCRGGRDT 2955
            |.:       |..:|||...| |.:|:              :.|.|..:..| :.::|.....:.
Zfish   664 DFIEFNPVHGRSLQYILEYSN-DVLEE--------------SSLPLTIIWSG-SELDLDPAEPEQ 712

  Fly  2956 PVTVHNLHQYISLVTYWFLIEGVQKQFEALREGFDSVFPIQRLRMFYPEELECVFCGSGSEQQHS 3020
            .:|..|..:::.........:.|::.||..|.||......:.:.||.||||..|..|:    :..
Zfish   713 HITTSNRTKFVDEYVDHIFNQSVKEAFEEFRRGFFRGCEKRLVEMFEPEELRGVLVGN----EEY 773

  Fly  3021 RWEIKMLQESCRTDHGFHQDSQAIQYLYEILASYNRDEQRAFLQFVTGSPRLPTGGFKALTPPLT 3085
            .|.|  |:::...:..|:.|...|...:|:......:|:::||.|:||..|:|..|..|:...:|
Zfish   774 DWNI--LKQNTTYEGVFNADHPVIISFWEVFDDLTPNEKKSFLLFLTGFERVPILGMSAVKMRVT 836

  Fly  3086 IVRKTLDENQNPNDYLPSVMTCVNYLKLPDYSSREVMRQKL 3126
            .:..:.:      |:||..:||.:.|:||.|..||.:|.|:
Zfish   837 HLANSTE------DHLPETLTCHSLLQLPKYEKRETLRAKV 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669
WWE 1409..1481 CDD:128922
FAM199X <1985..2074 CDD:292442
HECTc <2818..3138 CDD:294058 72/301 (24%)
herc5.1XP_017211386.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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