Sequence 1: | NP_001189170.1 | Gene: | ctrip / 40596 | FlyBaseID: | FBgn0260794 | Length: | 3140 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005263140.1 | Gene: | HERC6 / 55008 | HGNCID: | 26072 | Length: | 1034 | Species: | Homo sapiens |
Alignment Length: | 1241 | Identity: | 233/1241 - (18%) |
---|---|---|---|
Similarity: | 399/1241 - (32%) | Gaps: | 431/1241 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 1990 SGNSNSTGSGSGAGLAYTVSQHGAGSGAGGLNAAAVAASISKSISHANLLAAANRERARQWVREQ 2054
Fly 2055 ------AVDFVKRYTEQEAKRSK----AASESGATQS------GSS-GVGLSSTG---------- 2092
Fly 2093 ---NTPLSTAGSTNVLERLSSILFKLNGSYHDCLDALLELKTILLESD--ISPFEVNHSGLIKAM 2152
Fly 2153 LNYMTSETGLVERDARLRSFMHVFAGLPLEPLLQNVGQMPTIE---PIAFGAFVAKLNGCVTQLE 2214
Fly 2215 ----------QFPVKVHDFPAGPGGRSNQSALRFFNTHQLKCNLQRHPQCNNLRQWKGGTVKIDP 2269
Fly 2270 LAMVQAIERYLVVRGYGGIRADSDDDSEEDMDDNVAAVVLSQASFRHKLQFTIGDHVLPYNMTVY 2334
Fly 2335 QAVKQFSPLVSEQPETDNESETLLGNASIWVQQHTIHYRPVEEEVTSGAAAGAASSSSSCSSGVQ 2399
Fly 2400 KQQSSSSSASSCVNATSSCSSSSGVASGGGSLTKKAHKSSSKFMRKKTELWHEGIAPVVISALKP 2464
Fly 2465 FLSSSLPADVVTVQDASLDALCML---RVIHALNRHWDHLYGCVVRQNIIPQSDFIHPKIMAKAN 2526
Fly 2527 RQLQDPLVIMTGNLPQWLPQIGMACPFLFPFETRHLLFYATSFDRDRALQRLLDTTPDLNAAESS 2591
Fly 2592 ERVAPRLDRRKRAISRTEILKQAEHILQDFGHSKALLEIQYE------------------NEVGT 2638
Fly 2639 GLGPTLEFYA-----------LVSAELQRTDLGLWNGSDSYKQNSVTIVDVVKANSAVLHIEDAL 2692
Fly 2693 EATTTDQNTPAVAGASLVSSSTTTTTTTAQQHQHPPT----RSSSRSHVLRSGAGQQPVEHSSSS 2753
Fly 2754 AGANENALNMVIAQQFSDTNSANPAAIDNPSSTTTATTVVQHNTTTNNSSIITTTTTTSYVHAV- 2817
Fly 2818 -------HGLFPLP-LGKSSKLPQMTKAKAKFKFL-GKFMAKAVMDSRMLDLPFSLPFYRWLVSE 2873
Fly 2874 EHSIGLADLMRVAPEVQNTLVRLQDLVRQREYILSDPNIDAMEKTEKIEQLDLDGCPIADLG--- 2935
Fly 2936 -LDFVLPGHAN-IELCRGGRDTPVTVHNLHQYIS-LVTYWFLIEGVQKQFEALREGFDSVFPIQR 2997
Fly 2998 LRMFYPEELECVFCGSGSEQQHSRWEIKMLQESCRTDHGFHQDSQAIQYLYEILASYNRDEQRAF 3062
Fly 3063 LQFVTGSPRLPTGGFKALTPPLTIVR--KTLDENQNPNDYLPSVMTCVNYLKLPDYSSREVMRQK 3125
Fly 3126 LKVAAN 3131 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ctrip | NP_001189170.1 | Extensin_2 | <688..731 | CDD:252669 | |
WWE | 1409..1481 | CDD:128922 | |||
FAM199X | <1985..2074 | CDD:292442 | 15/93 (16%) | ||
HECTc | <2818..3138 | CDD:294058 | 84/324 (26%) | ||
HERC6 | XP_005263140.1 | RCC1_2 | 27..54 | CDD:290274 | |
RCC1_2 | 89..118 | CDD:290274 | 1/4 (25%) | ||
RCC1 | 105..155 | CDD:278826 | 10/50 (20%) | ||
RCC1 | 158..208 | CDD:278826 | 6/49 (12%) | ||
RCC1 | 215..263 | CDD:278826 | 15/62 (24%) | ||
RCC1_2 | 250..279 | CDD:290274 | 11/71 (15%) | ||
RCC1 | 266..313 | CDD:278826 | 14/89 (16%) | ||
HECTc | 684..1026 | CDD:238033 | 93/422 (22%) | ||
HECTc | 711..1026 | CDD:214523 | 87/389 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |