DRSC/TRiP Functional Genomics Resources

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Protein Alignment ctrip and Smurf

DIOPT Version :9

Sequence 1:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster


Alignment Length:1115 Identity:218/1115 - (19%)
Similarity:330/1115 - (29%) Gaps:441/1115 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly  2261 KGGTVKIDPLAMVQAIERYLVVRGYGGIRADSDDDSEED---------MDDNVAAVVLSQAS--- 2313
            |.|....:|||         :|...|.:|..|:|||.||         ..||.....::.|:   
  Fly   138 KDGPSSGNPLA---------IVGPSGDVRGPSEDDSSEDSLPEGWEERRTDNGRVYYVNHATKST 193

  Fly  2314 --------------------FRHKL-QFTIGDHVLPYN----------MTVYQAVKQFSPLVSEQ 2347
                                .||.. ....||...|..          |......:..|...|::
  Fly   194 QWDRPRQPGVVGSSHATSPQQRHNTHNGNSGDRQAPAGPTRSTTCTNLMNNGHRSRDLSVTASDE 258

  Fly  2348 PETDNESETLLGNASIWVQQHTIHYRPVEEEVTSGAAAGAASSSSSCSSGVQKQ--------QSS 2404
            .....|..:.:|      :::|....||....|.|....:::|||:....::::        .||
  Fly   259 RRHSTEILSSVG------KENTSPTTPVSATTTPGKKTSSSNSSSAGGRTLEQRPTNEPATPTSS 317

  Fly  2405 SSSAS----------------------------------SCVNATSSCSSSSGVASGGGSLTKKA 2435
            ::|||                                  :.||..:...|:||..||..:..:.|
  Fly   318 TTSASVRLHSNDNHVKTPKHQTNGHAPPESTPTSPTGQQNYVNGNAQNGSTSGNGSGQAAQPQSA 382

  Fly  2436 HKSSSKFMRKKTELWHEGIAPVVISALKPFLSSSLPADVVTVQDASLDALCMLRVIHALNRHWDH 2500
            ...           |.:..|....|   |..::|.|                             
  Fly   383 SNG-----------WTQEDAATTTS---PSTTTSPP----------------------------- 404

  Fly  2501 LYGCVVRQNIIPQSDFIHP--KIMAKANRQLQDPLVIMTGNLPQWLPQIGMACPFLFPFETRHLL 2563
                  |.:..|.:..|.|  .:...||..:..|..                             
  Fly   405 ------RHSQSPPTPNISPPASVTPSANGNVHSPNA----------------------------- 434

  Fly  2564 FYATSFDRDRALQRLLDTTPDLNAAES-SERVAPRLDRRKRAISRTEILKQAEHILQDFGHSKAL 2627
                            ::||..:...| |...|....|.:|..||    :|.|.           
  Fly   435 ----------------NSTPAGSGGGSRSYTAATPGQRSQRRSSR----QQGEE----------- 468

  Fly  2628 LEIQYENEVGTGLGPTLEFYALVSAELQRTDLGLWNGSDS---------YKQNSVTIVDVVKANS 2683
                                   |:..:|:..|..||..|         .:..|..|....:|..
  Fly   469 -----------------------SSTRRRSSRGTRNGGTSGGGGGGGSGQRYASAAIAAANQAAR 510

  Fly  2684 AVLHIEDALEATTTDQNTPAVAGASLVSSSTTTTTTTAQQHQHPP--TRSSSRSHVLRSGAGQQP 2746
            ..|.:....|..||.|      |........|..:|     .|.|  .|.....|:.....|..|
  Fly   511 PFLDLPPGYEMRTTQQ------GQVYFYHIPTGVST-----WHDPRIPRDFDTQHLTLDAIGPLP 564

  Fly  2747 ---------------VEHSSSSAGANENALNMVIAQQF--------SDTNSANPAAIDNPSSTTT 2788
                           |:|::.:....:..|:..|.|..        |..|:..||    |.|.|.
  Fly   565 SGWEQRKTASGRVYFVDHNNRTTQFTDPRLSGSILQMIRRGTVPPTSAANAGTPA----PPSATP 625

  Fly  2789 AT-----TVVQHNTTTNNSSIITTTTTTSYVHAV-----HGLFP----LP------LGKSSKL-- 2831
            ||     .|....|..:|::..|.||||:..|.:     .||..    ||      :||...|  
  Fly   626 ATPSAAAAVPPQATPASNATPTTLTTTTNPPHRIVPDLPQGLLEGADLLPKYRRDLVGKLRALRT 690

  Fly  2832 ------PQ--------------------MTKAKAK------------------------------ 2840
                  ||                    :.|.:||                              
  Fly   691 ELQTMQPQSGHCRLEVSRNEIFEESYRLIMKMRAKDMRKRLMVKFKGEEGLDYGGVAREWLHLLS 755

  Fly  2841 ------------------------------------FKFLGKFMAKAVMDSRMLDLPFSLPFYRW 2869
                                                |.|:|:.:..||.....||..|:.|||:.
  Fly   756 REMLNPQYGLFQYSRDDHYTLQINPDSGVNPDHLSYFHFVGRTLGIAVFHGHCLDGGFTTPFYKQ 820

  Fly  2870 LVSEEHSIGLADLMRVAPEVQNTLVRLQDLVRQREYILSDPNIDAMEKTEKIEQLDLDGCPIADL 2934
            |:::  .|.|.|:..|.|          ||.|...::|.......:|.|..:|........:   
  Fly   821 LLNK--PITLGDIEGVDP----------DLHRSLTWMLESNISGIIESTFSVENNSFGALVV--- 870

  Fly  2935 GLDFVLPGHANIELCRGGRDTPVTVHNLHQYISLVTYWFLIEGVQKQFEALREGFDSVFPIQRLR 2999
                    |   ||..||...|||..|..:|:.|...:..:.|:::||.||::||..:.|...||
  Fly   871 --------H---ELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCELIPSHLLR 924

  Fly  3000 MFYPEELECVFCGSGSEQQHSRWEIKMLQESCRTDHGFHQDSQAIQYLYEILASYNRDEQRAFLQ 3064
            .|...|||.|..|..|...:. |     :.:.|..|..::.:|.: :.::::.||:.:.:...||
  Fly   925 PFDERELELVIGGISSIDVND-W-----RNNTRLKHCTNETTQVL-WFWQVVESYSSEMRARLLQ 982

  Fly  3065 FVTGSPRLPTGGFKALT-------PPLTIVRKTLDENQNPNDYLPSVMTCVNYLKLPDYSSREVM 3122
            |||||.|:|..||:||.       |.|..:..|.|.   |...||...||.|.:.||.|.:.:::
  Fly   983 FVTGSSRVPLQGFRALQGSTGAVGPRLFTIHLTADV---PTQNLPKAHTCFNRIDLPPYETYQLL 1044

  Fly  3123 RQKLKVAANE 3132
            ..||..|..|
  Fly  1045 CDKLTQAVEE 1054

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669
WWE 1409..1481 CDD:128922
FAM199X <1985..2074 CDD:292442
HECTc <2818..3138 CDD:294058 100/426 (23%)
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028
WW 169..198 CDD:278809 3/28 (11%)
WW 514..546 CDD:197736 9/42 (21%)
WW 562..594 CDD:197736 3/31 (10%)
HECTc 702..1058 CDD:238033 91/389 (23%)
HECTc 726..1058 CDD:214523 88/365 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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