Protein Alignment ctrip and Ube3c

DIOPT Version :9

• Sequence 1: NP_001189170.1
• Gene: ctrip / 40596
• FlyBaseID: FBgn0260794
• Length: 3140
• Species: Drosophila melanogaster
• Sequence 2: XP_038964472.1
• Gene: Ube3c / 362294
• RGDID: 1559986
• Length: 1083
• Species: Rattus norvegicus
• Alignment Length: 1194
• Identity: 233/1194 - (19%)
• Similarity: 382/1194 - (31%)
• Gaps: 429/1194 - (35%)

  Fly  2090 STGNTPLST-AGSTNVLERLSSIL-FKLNGSYHDCLDALLELKTILLESDISPFEVNHSGLIKAM 2152
            |:.||.|.. ..|:.|:..:..|| :.::..|:..|..|:..|   |.|.|...:::...:.|.:
  Rat   176 SSENTYLPVLQDSSYVVSVIEQILHYMVHSGYYRSLYLLINSK---LPSSIEYSDLSRVPMAKTL 237

  Fly  2153 L---------NYMTSETGLVERDARLRSFMHVFAGLP--------LEPLLQNVGQMPTIEPIAFG 2200
            |         .|.:...|  .|.....:|...|.|.|        :.|.|.:...:...||....
  Rat   238 LENVLKPLHFTYSSCPEG--ARHQVFSAFTEEFLGAPFTDQIYHFIIPALADTQTVFPYEPFLNA 300

  Fly  2201 AFV-----AKLNGCVTQLEQFPVKVHDFPAGPGGRSNQSALRFFNTHQLKCNLQRHPQCNNLRQW 2260
            ..:     :|.:..|..|..|.:.:.:...  |..|....|.:...  |:..|.:.|....
  Rat   301 LLLLESRSSKRSSGVPWLFYFVLTIGENYL--GALSEDGLLVYLRV--LQTFLSQLPASPT---- 357

  Fly  2261 KGGTVKIDPLAMVQAIERYLVVRGYGGIRADSDDDSEE------DMDDNVAAVVLSQASFRHKLQ 2319
              |..:.||                   .:||:||:||      ..|..|:|..:::...| ||
  Rat   358 --GVGRPDP-------------------TSDSEDDNEETDQPTSPEDGRVSAPYITEECLR-KL- 399

  Fly  2320 FTIGDHVLPYNMTVYQAVKQFSPLVSEQPETDNESETLLGNASIWVQQHTIHYRPVEEEVTSGAA 2384
                                         :|..::.|||.  .:|...       ..|||.:..|
  Rat   400 -----------------------------DTKQQTNTLLN--LVWRDS-------ASEEVFTRMA 426

  Fly  2385 AGAASSSSSCSSGVQKQQSSSSSA----SSCVNATSSCSSSSGVASGGGSLTKKAHKSSSKFMRK 2445
                   |.|.:.:.:.:......    |...||                          :|:|
  Rat   427 -------SICHTLMVQHRMMVPKVRLLYSLAFNA--------------------------RFLR- 457

  Fly  2446 KTELWHEGIAPVVISALKPFLSSSLPADVVTVQDASLDALCMLRVIHALNRHWDHLYGCVV---- 2506
              .||              ||.||:...::|..        |:.::..::|      |..:
  Rat   458 --HLW--------------FLISSMTTQMITGS--------MVPLLQVISR------GSPMSFED 492

  Fly  2507 RQNIIP-----QSDFIHPKIMAKANRQLQDPLVIMTGNLPQWLPQIGMACPFLFPFETRHLLFYA 2566
            ...|||     .|.|.|..|....|....||:.:           :|.....:.||....|:..:
  Rat   493 SSRIIPLFYLFSSLFSHSLISIHDNEFFGDPIEV-----------VGQRQLSMMPFTLEELILLS 546

  Fly  2567 TSFDRDRALQRLL----DTTPD-----------LNAAESSE----------------RVAPRL-- 2598
            ... ||..|..:.    :|.|:           :....:||                :|...|
  Rat   547 RCL-RDACLGIIKLAYPETKPEVREEYVSAFQSIGVTTNSEMQHCIQMEQKRWVQLFKVITNLVK 610

  Fly  2599 -----DRRKRAISRTEILKQAEHILQD---------------------FGHSKALLEIQYENEVG 2637
                 |.|:........|.:.|.|..|                     .|..::.||:..|:
  Rat   611 MLKSRDTRRNFCPPNHWLSEQEDIKADKVTQLYVPASRHVWRFRRMGRIGPLQSTLEVGLES--- 672

  Fly  2638 TGLGPTLE-------------------------FYALVSAELQRTDLGLWNGSDSYKQNSVTIVD 2677
                |.|.                         |..|:.|:.|..            |.....:|
  Rat   673 ----PPLSVSEERQLAILTELPFVVPFEERVKIFQRLIYADKQEV------------QGDGPFLD 721

  Fly  2678 VVKANSAVLHI-EDALEATTTDQNTPAVAGASLVSSSTTTTTTTAQQHQHPPTRSSSRSHVLRSG 2741
            .:.......:| |||.     |:.:|                     ...|..:...|.|:|.:
  Rat   722 GINVTIRRNYIYEDAY-----DKLSP---------------------ENEPDLKKRIRVHLLNA- 759

  Fly  2742 AGQQPVEHSSSSAGAN-----ENALNMVIAQQFSDTNSANPAAIDNPSSTTTATTVVQHNTTTNN 2801
                   |....||.:     ...||.::...|            ||:.....||         |
  Rat   760 -------HGLDEAGIDGGGIFREFLNELLKSGF------------NPNQGFFKTT---------N 796

  Fly  2802 SSIITTTTTTSYVHAVHGLFPLPLGKSSKLPQMTKAKA---KFKFLGKFMAKAVMDSRMLDLPFS 2863
            ..:               |:|.|..      ||....:   .:.|||:.:.||:.::.:::|||:
  Rat   797 EGL---------------LYPNPAA------QMLVGDSFARHYYFLGRMLGKALYENMLVELPFA 840

  Fly  2864 LPFYRWLVSEEHSIGLADLMRVAPEVQNTLVRLQDLVRQREYILSDPNIDAMEKTEKIEQLDLDG 2928
            ..|...|:.....:.:..|..:.|||...|:.|:..                  .|.:|
  Rat   841 GFFLSKLLGTSADVDIHHLASLDPEVYKNLLFLKSY------------------EEDVE------ 881

  Fly  2929 CPIADLGLDFVLP----GHAN-IELCRGGRDTPVTVHNLHQYISLVTYWFLIEGVQKQFEALREG 2988
                :|||:|.:.    |.|. :||..||:|.|||..|...||.||..:.|.:.::....|.|:|
  Rat   882 ----ELGLNFTVVNNDLGEAQVVELKFGGKDIPVTGANRIAYIHLVADYRLNKQIRPHCLAFRQG 942

  Fly  2989 FDSVFPIQRLRMFYPEELECVFCGSGSEQQHSRWEIKMLQESCRTDH--GFHQDSQAIQYLYEIL 3051
            ..:|..::.||||..:|::.:.  ||::...|..::|..     |::  |:..|...|:..:.::
  Rat   943 LANVVSLEWLRMFDQQEIQVLI--SGAQVPVSLEDLKSF-----TNYSGGYSADHPVIKIFWRVV 1000

  Fly  3052 ASYNRDEQRAFLQFVTGSPRLPTGGFKALTPPLTIVRKTLDENQNPNDYLPSVMTCVNYLKLPDY 3116
            ..:..:|:|..|:|||...|.|..|||.|.|...|.....|..:     ||:..||:|.||||::
  Rat  1001 EGFTDEEKRKLLKFVTSCSRPPLLGFKELYPAFCIHNGGSDLER-----LPTASTCMNLLKLPEF 1060

  Fly  3117 SSREVMRQKLKVAANEGSMSFHLS 3140
            ....::|.|| :.|.|.:..|.||
  Rat  1061 YDEALLRSKL-LYAIECAAGFELS 1083

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ctrip	NP_001189170.1	Extensin_2	<688..731	CDD:252669
		WWE	1409..1481	CDD:128922
		FAM199X	<1985..2074	CDD:292442
		HECTc	<2818..3138	CDD:294058	89/329 (27%)
Ube3c	XP_038964472.1	IQ	47..64	CDD:197470
		HECTc	725..1081	CDD:238033	110/472 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000