DRSC/TRiP Functional Genomics Resources

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Protein Alignment ctrip and Hace1

DIOPT Version :9

Sequence 1:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:XP_006256657.1 Gene:Hace1 / 361866 RGDID:1306114 Length:916 Species:Rattus norvegicus


Alignment Length:1116 Identity:228/1116 - (20%)
Similarity:379/1116 - (33%) Gaps:366/1116 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  2139 SPFEVNHS-GLIKAMLNYMTSETGLVERDARLRSFMHVFAGLPLEPLLQNVGQMPTIEPIAFGA- 2201
            |.|:||:: |.:|..|.::.:..|.||                ...||...|..|..:.|: |. 
  Rat    53 SKFDVNYAFGRVKRSLLHIAANCGSVE----------------CLVLLLKKGANPNYQDIS-GCT 100

  Fly  2202 --FVAKLNG---CVTQLEQFPVKVHDFPAGPGGRSNQSALRFFNTHQLKCNLQRHPQCNNLRQWK 2261
              .:|..||   |:::|.::...|                          |:     |||    :
  Rat   101 PLHLAARNGQKKCMSKLLEYSADV--------------------------NI-----CNN----E 130

  Fly  2262 GGTVKIDPLAMVQAIERYLVVRGYGGIRAD-----SDDDSEEDMDD------------------- 2302
            |.|          || .:|.|.|...:..|     :|.|.|:.|..                   
  Rat   131 GLT----------AI-HWLAVNGRTELLHDLVQHVTDVDVEDAMGQTALHVACQNGHKTTVQCLL 184

  Fly  2303 ---------NVAAVVLSQASFRHKLQFTI------GDHVLP---------------YNMTVYQAV 2337
                     |||.......:..|..:.|.      |...||               |..|. :.:
  Rat   185 DSGADINRPNVAGATPLYFACSHGQRDTAQILLLRGAKYLPDKNGVTPLDLCVQGGYGQTC-EVL 248

  Fly  2338 KQFSPLVSEQPETDNESETLLGNASIWVQQHTIHYRPVEE-EVTSGAAAGAASSSSSCSSGVQKQ 2401
            .|:.|.:.:......::|.|..|....|.||.......:. ::.:|.|..|.::.....|..:..
  Rat   249 IQYHPRLFQTIVQMTQNEDLRENMLRQVLQHLSQQSESQYLKILTGLAEVATTNGHKLLSVFRLV 313

  Fly  2402 QSSSSSASS------------C-VNATSSCSSSSGVASG-GGSLTKKAHKSSSKFMRKKTELWHE 2452
            .|.|||..:            | |......|.|:|:..| .|:.|.:     |:..:....|||.
  Rat   314 SSLSSSYEAQMKSLLRIVRIFCHVFRIGPSSPSNGMDMGYNGNKTPR-----SQVFKPLELLWHS 373

  Fly  2453 GIAPVVISALKPFLSSSLPADVVTV------QDASLDALCMLRVIHALNRHWDHLYGCVVRQNII 2511
            ....:|:.|.:...:....||:.::      ||.  :|.|    |.|......   |...|.:..
  Rat   374 LDEWLVLIATELMKNKEDSADITSILLKQKGQDQ--EASC----ISAFEPPGP---GSYERLSTG 429

  Fly  2512 PQSDFIHPKIMA---KANRQLQDPLVIMTGNLPQWLPQIGMAC----------PFLFPFETRHLL 2563
            |...  .|.::|   :|:...||.:.:....|...:....|.|          |....|..:|  
  Rat   430 PGES--KPDVLAGKQEASADCQDVISVTANRLSAVIQAFYMCCSCQMPPGMTSPRFIEFVCKH-- 490

  Fly  2564 FYATSFDRDRALQRLLDTTPDLNAAESSERVAPRLDRRKRAISRTEILKQAEHIL--QDFGHSKA 2626
                    |..|:..::..|.:           ..|.....:...|::.:..||:  |.|   |.
  Rat   491 --------DEVLKCFVNRNPKI-----------IFDHFHFLLECPELMSRFMHIIKAQPF---KD 533

  Fly  2627 LLEIQYENEVGTGLGPTLEFYALVSAELQRTDLGLWNGSDSYKQNSVTIVDVVKANSAVLHIEDA 2691
            ..|..||: :.:| .|..:   :|...:...|:.|.: .||..::|..||.  |||.|.|....|
  Rat   534 RCEWFYEH-LHSG-QPDSD---MVHRPVSENDILLVH-RDSIFRSSCEIVS--KANCAKLKQGIA 590

  Fly  2692 LEATTTDQNTPAVAGASLVSSSTTTTTTTAQQHQHPPTRSSSRSHVLRSGAGQQPVEHSSSSAGA 2756
            :                                         |.|                    
  Rat   591 V-----------------------------------------RFH-------------------- 594

  Fly  2757 NENALNMVIAQQFSDTNS---ANPAAIDNPSSTTTAT-TVVQHNTTTNNSSIITTTTTTSYVHAV 2817
            .|..:...:.:::.|..|   .||   |....|.:|. |..|.|             :.|||:..
  Rat   595 GEEGMGQGVVREWFDILSNEIVNP---DYALFTQSADGTTFQPN-------------SNSYVNPD 643

  Fly  2818 HGLFPLPLGKSSKLPQMTKAKAKFKFLGKFMAKAVMDSRMLDLPFSLPFYRWLVSEEHSIGL--- 2879
            |..:                   |:|.|:.:..|:...:::::.|:..||:      |.:|:   
  Rat   644 HLNY-------------------FRFAGQILGLALNHRQLVNIYFTRSFYK------HILGIPVN 683

  Fly  2880 -ADLMRVAPEVQNTLVRLQDLVRQREYILSDPNIDAMEKTEKIEQLDLDGCPIADLGLDF----- 2938
             .|:..:.||....|          ::||.:                    .|:||||:.     
  Rat   684 YQDVASIDPEYAKNL----------QWILDN--------------------DISDLGLELTFSVE 718

  Fly  2939 --VLPGHANIELCRGGRDTPVTVHNLHQYISLVTYWFLIEGVQKQFEALREGFDSVFPIQRLRMF 3001
              |......:.|..||....||.:|..:|:.|||...:...:|.|..|..:||....|...:::|
  Rat   719 TDVFGAMEEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQLF 783

  Fly  3002 YPEELECVFCGSGSEQQHSRWEIKMLQESCRTDH--GFHQDSQAIQYLYEILASYNRDEQRAFLQ 3064
            ...|||.:..|. .|...:.| ||      .|::  |:.::...||:.:|::....::|:...||
  Rat   784 DEYELELLLSGM-PEIDVNDW-IK------NTEYTSGYEREDPVIQWFWEVVEDMTQEERVLLLQ 840

  Fly  3065 FVTGSPRLPTGGFKALTPPLTIVRKTLDENQNPNDYLPSVMTCVNYLKLPDYSSREVMRQKLKVA 3129
            |||||.|:|.|||..:.....:...|:.......:.||:..||:|.||||:|.|:|:::.:|.||
  Rat   841 FVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVA 905

  Fly  3130 ANEGSMSFHLS 3140
            .:.||..:.::
  Rat   906 LHCGSYGYTMA 916

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669
WWE 1409..1481 CDD:128922
FAM199X <1985..2074 CDD:292442
HECTc <2818..3138 CDD:294058 83/332 (25%)
Hace1XP_006256657.1 ANK repeat 66..95 CDD:293786 8/44 (18%)
ANK 66..93 CDD:197603 8/42 (19%)
Ank_2 69..194 CDD:289560 31/187 (17%)
ANK 92..217 CDD:238125 29/171 (17%)
ANK repeat 97..128 CDD:293786 8/62 (13%)
ANK repeat 130..161 CDD:293786 10/41 (24%)
Ank_2 135..222 CDD:289560 15/87 (17%)
ANK repeat 163..194 CDD:293786 1/30 (3%)
ANK repeat 196..221 CDD:293786 3/24 (13%)
Ank_4 199..249 CDD:290365 7/50 (14%)
HECTc 561..910 CDD:238033 109/491 (22%)
HECTc 586..909 CDD:214523 98/462 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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