Sequence 1: | NP_001189170.1 | Gene: | ctrip / 40596 | FlyBaseID: | FBgn0260794 | Length: | 3140 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
Alignment Length: | 2972 | Identity: | 563/2972 - (18%) |
---|---|---|---|
Similarity: | 930/2972 - (31%) | Gaps: | 1172/2972 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 1088 LLQGL---QSHDESQQLQAAIEMCQMLVMGN--EDTLAGFPIKQVVPALIQL----LRMEHNFDI 1143
Fly 1144 MNNACRALAYMLEALPRSSGTVVE---AVPVFLEKLQVIQ-----CMDVAEQSLSALEILSRRHN 1200
Fly 1201 KAILQANGISACLTYL-DFFSIVAQ---RAALAIAANCCLNMHPEEFHFVAESLPLLARLLSQQD 1261
Fly 1262 K-------KCIESVCSAFCR----------------LVESFQHDGQRL----------------- 1286
Fly 1287 ----------QQIASPDLLKNCQQLLLVTPAILNTGTFTAVVRMLSLMCCSCPDLAISLLRNDIA 1341
Fly 1342 ATLLYLLTGNAEPAAASATHVELI--------------SRSPSELYELTCLIGELMPRLP----- 1387
Fly 1388 ---------LDGIFAVDSLLDRPTL-------NTQDQV-----HW----------QWRDDRGSWH 1421
Fly 1422 NYSTIDSRLIEAANQSSEDEISLSTFGR----TYTVDFHAMQQINEDTGTTRPVQR---RLN--H 1477
Fly 1478 NYVAPM--SAGQDLTTTSAGSAAAGGASTSAAAAAASSNNNNNNNNNPPGNSVNLNQVKRRPSLD 1540
Fly 1541 ARIACLKEERG---LAADFIKHIFNVLYEVYSSSAGPNVRYKCLRALLRMVYYATPELLRQV--L 1600
Fly 1601 KYQLVSSHIAGMLGSNDLRIVVGA--------------LQMAEILMRQLPDVFGTHFRREGVIYQ 1651
Fly 1652 FTQLTDPN-------------NPICANPS-------PKPLS------------------------ 1672
Fly 1673 -------------------------------------ATATP------TANAG------------ 1682
Fly 1683 ---GSQSAP----ASA---------------NSLQVN--------------PFFM---------- 1701
Fly 1702 ---------DSAPGLSSASTTPSSSK--HQSYSVKSFSHAM-NALTASAKGTPSGALDATSSSTT 1754
Fly 1755 AGGYNYSSS--APSSS------------------SGAPAAYFVTQQGDPRQYV------HFQ--Q 1791
Fly 1792 PAVPAPPPQQE--------LLPSGVQQQGQQVPQVIYQPHHQQPAHL-------VLASTSSGAAS 1841
Fly 1842 SSSSSSSSSSASALQHKMTDMLKRKAPPKRKSQSGGRA--------------------------- 1879
Fly 1880 ---------KSRQEDAA---------------------------VAPAGSGPGGAPPSSSGSA-- 1906
Fly 1907 ---MHELLSR-----------------ATSLG-------------SGNGGRSTPN---SGGGSGS 1935
Fly 1936 S----------KSRFNAGNSS----NAGSSKSSFLASLNPARWGR----QTH------------- 1969
Fly 1970 ----------------QNHHHHHQQSQQQHH---------GL----SKDSGNSNSTGSGS----- 2000
Fly 2001 -------GAGLAYTVSQHG-------------AGSGAGGLNAAAVAASIS----------KSISH 2035
Fly 2036 ANLLAAANRERARQWVREQAVD-----------------FVKRYTE----------QEAKRSKAA 2073
Fly 2074 -SESGATQSGSSGVGLSSTGNTPLSTAGSTNVLERLSSILFKLNGSYHDCLDAL-----LELKTI 2132
Fly 2133 LLESDISPFEVNHSGLIKAML-NYMTSETGLVERDARLRSFMHVFAGLPLEPLLQNVGQMPTIEP 2196
Fly 2197 IAFGAFVAKLN-------------GC--VTQL----------------------------EQFPV 2218
Fly 2219 KVHDFPAGPGGRSNQSALRFF-----NTHQLKCNLQRHPQCNNLRQWKGGTVKIDP-------LA 2271
Fly 2272 MVQ-------------------------------------------------AIERYLVVRGYG- 2286
Fly 2287 ------GIRADSDDDSEED-----------------MDDNVAAVVLSQASFRHKLQFTIGDHVLP 2328
Fly 2329 YNMTVYQAVKQFSPLV--------------SEQ-----------------------------PET 2350
Fly 2351 DNESE------TLLGNASIWVQQHTIHYRPVEEEVTSGAAAGAASSSSSCSSGVQKQQSSS---- 2405
Fly 2406 ---SSASSCVNATSSCSSS---------------------------SGVASGG------------ 2428
Fly 2429 ----GSLTKKAHKSSSKFMRKKTELWHEGIAPVVISALKP------------------------- 2464
Fly 2465 -FLSSSLPADV-VTVQDASL----DALCMLRVIHALNRH------WDHLYGCVVRQNIIPQSDFI 2517
Fly 2518 HPKIMAKANRQLQDPLVIMTGNLPQWLPQIGMACPFLFPFETRHLLFYATSFDRDRA---LQRLL 2579
Fly 2580 DTTPDLNAAESSERV---APRLDRRKRAISR-----------TEILKQAEHILQDFGHSKALLEI 2630
Fly 2631 QYENEVGTGLGPTLEFYALVSAELQRTDLGLWNGSDSYKQNSVTIVDVVKANSAVLHIEDALEAT 2695
Fly 2696 TTDQNTPAVAGASLVSSSTTTTTTTAQQHQHPPTRSSSRSHVLRSGAGQQPVEHSSSSAGANENA 2760
Fly 2761 LNMVIAQQFSDTNSANPAAIDNPSSTTTATTVVQHNTTTNNSSIITTTTTTSYVHAVHGLFPLPL 2825
Fly 2826 GKSSKLPQMTKAKAKFKFLGKFMAKAVMDSRMLDLPFSLPFYRWL-------------------- 2870
Fly 2871 ----VSEEHSI----------------------GLADLMRVAPEVQNTLVRLQDLVRQREYILSD 2909
Fly 2910 PNIDAMEKTEKIEQLDL---DGCPIA--DLGLDFV-LP-----GHANIELCRGGRDTPVTVHNLH 2963
Fly 2964 QYISLVTYWFLIEGVQKQFEALREGFDSVFPIQRLRMFYPEELECVFCGSGSEQQHSRWEIKMLQ 3028
Fly 3029 ESCRTDHGFHQDSQAIQYLYEILASYNRDEQRAFLQFVTGSPRLPTGGFKALTPPLTIVRKTLDE 3093
Fly 3094 NQNPNDYLPSVMTCVNYLKLPDYSSREVMRQKLKVAANEGSMSFHLS 3140 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ctrip | NP_001189170.1 | Extensin_2 | <688..731 | CDD:252669 | |
WWE | 1409..1481 | CDD:128922 | 19/95 (20%) | ||
FAM199X | <1985..2074 | CDD:292442 | 23/155 (15%) | ||
HECTc | <2818..3138 | CDD:294058 | 118/376 (31%) | ||
Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | 6/26 (23%) |
ANK | 396..509 | CDD:238125 | 27/124 (22%) | ||
ANK repeat | 422..453 | CDD:293786 | 4/30 (13%) | ||
ANK repeat | 455..484 | CDD:293786 | 9/39 (23%) | ||
F5_F8_type_C | 1173..1298 | CDD:329041 | 22/124 (18%) | ||
MIB_HERC2 | 1333..1389 | CDD:310955 | 7/55 (13%) | ||
DamX | 1576..>1725 | CDD:330571 | 26/157 (17%) | ||
HECTc | 2265..2725 | CDD:238033 | 151/594 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D10145at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR45670 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3704 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.950 |