DRSC/TRiP Functional Genomics Resources

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Protein Alignment ctrip and SPAC12B10.01c

DIOPT Version :9

Sequence 1:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:NP_594633.2 Gene:SPAC12B10.01c / 2541575 PomBaseID:SPAC12B10.01c Length:1647 Species:Schizosaccharomyces pombe


Alignment Length:2226 Identity:438/2226 - (19%)
Similarity:714/2226 - (32%) Gaps:912/2226 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   988 NSSAGQAASSNSNNVTATGSGSAPGGGPTSTGTTSGTQHGSGSGAAAAVDSESDDSEVGRLQALL 1052
            |:..|.....|.|:...:.:||     |..:......|...........|..:..:|:||::...
pombe   261 NNDEGDDEDENENDELRSENGS-----PNPSAAVINEQENMNMSGIEEYDETNLLNELGRIRRGN 320

  Fly  1053 EARGLPPHLFG------------ALGP---RVTHILH--RTIGNSSSSKANQLLQGLQS-HDESQ 1099
            :.:.|...:..            :|||   |.....|  |:..::...:..:||:|::. .|.:.
pombe   321 QFQSLASSILSSGNLENSDDEDVSLGPQTYRFNSSFHPFRSAFSAPGVQFGRLLEGIKDFSDPTV 385

  Fly  1100 QLQAAIEMCQMLVMGNEDTLAG-FPIKQVVPALIQLLRMEHNFD-------IMNNACRALAYMLE 1156
            |:.:..|:.:...|..||.|.| |.....:.|..::| ...|:|       :|.:....::.|:|
pombe   386 QMLSLQELSEAFAMSTEDMLVGLFSTDSYIAAFSEIL-SGRNYDFGEVSIQLMLSCTTCVSNMME 449

  Fly  1157 ALPRSSGTVVEA--VPVFLEKLQVIQCMDVAEQSLSALEILSRRHNKAILQANGISACLTYLDFF 1219
            |||.....:..:  |.:..|::..:|.:|:|||:|..||.||:.....||:..|:.|.|.|.|||
pombe   450 ALPLCMAKIAYSPIVRILCERMFDMQYIDIAEQALGVLERLSKDFGICILEHRGMLAALQYFDFF 514

  Fly  1220 SIVAQRAALAIAANCCLNMHPEEFHFVAESLPLLARLLSQQDKKCIESVCSAFCRLVESFQHDGQ 1284
            ....||.|:::|||||..:.........|.:|||:.:|...|...:....|....::||.:....
pombe   515 YTTVQRTAISLAANCCKFLDESNASAAEEIIPLLSNILQSSDTIVVSKAYSCLETIIESLKTSPN 579

  Fly  1285 RLQQIASPDLLKNCQQLLLVTPAILNTGT-------FTAVVRMLSLMCCSCPDLAISLLRNDIAA 1342
            .::.|.|.||:..      :..|:.|:.:       ...::.::|.:|.|...|.:..|.:::..
pombe   580 IIETIISEDLITT------IVNALTNSTSQNKSMHLQVQLLHIISSLCQSSSALILPFLNHNLPD 638

  Fly  1343 TLLYLLTGNAEPAAASATHVELISRSPSELYELTCLIGELMPRLPLDGIFAVDSLLDRPTLNTQD 1407
            .:..:|.|  .|.:.::...::|:.  ..||  .|.| ||:..|    :.|:.|||.:.|.|..|
pombe   639 VMYEMLCG--IPPSDTSHQADMITM--QSLY--YCPI-ELIENL----LRAITSLLPKNTSNLSD 692

  Fly  1408 QVHWQWRDDRGSWHNYSTIDSRLIEAANQSSEDEISLSTFGRTYTVDFHAMQQINEDTGTTRPVQ 1472
            :                 .:::|..           |::...|..:|.:                
pombe   693 E-----------------FNTKLYR-----------LNSILLTVVMDIY---------------- 713

  Fly  1473 RRLNHNYVAPMSAGQDLTTTSAGSAAAGGASTSAAAAAASSNNNNNNNNNPPGNSVNLNQVKRRP 1537
                  ::.|:...:.|            |.|:|.....|...||                    
pombe   714 ------FIVPLHDIRSL------------AVTTALKMLCSIRENN-------------------- 740

  Fly  1538 SLDARIACLKEERGLAADFIKHIFNVLYEVYSSSAGPNVRYKCLRALLRMVYYATPELLRQVLKY 1602
             ||..:..|.                                                       
pombe   741 -LDGLVCSLP------------------------------------------------------- 749

  Fly  1603 QLVSSHIAGMLGS--NDLRIVVGALQMAEILMRQLPDVFGTHFRREGVIYQFTQLTDPNNPICAN 1665
              :||.||.:|.|  :|..:...||:|...|:..||:|:.:.|.||||:.:...|.         
pombe   750 --LSSFIASILNSRKSDNFLKRDALEMCLFLLEALPNVYSSLFIREGVVQEVGFLV--------- 803

  Fly  1666 PSPKPLSATATPTANAGGSQSAPASANSLQVNPFFMDSAPGLSSASTTPSSSKHQSYSVKSFSHA 1730
                               :|..|....::::..|          |...|:::|:  .:|:.|  
pombe   804 -------------------RSTNADMKKIKLSISF----------SQNKSAARHE--ELKNLS-- 835

  Fly  1731 MNALTASAKGTPSGALDATSSSTTAGGYNYSSSAPSSSSGAPAAYFVTQQGDPRQYVHFQQPAVP 1795
              .|.:.||...|               ||                                   
pombe   836 --TLKSLAKEFLS---------------NY----------------------------------- 848

  Fly  1796 APPPQQELLPSGVQQQGQQVPQVIYQPHHQQPAHLVLASTSSGAASSSSSSSSSSSASALQHKMT 1860
                ::|.|.:....|.:|:.:           || |:.|....:.|..:......::...|::.
pombe   849 ----KEENLENSTLVQLKQLSK-----------HL-LSETKQDESFSELAKIFQEGSNITSHELL 897

  Fly  1861 DMLKRKAPPKRKSQSGGRAKSRQEDAAVAPAGSGPGGAPPSSSGSAMHELLSRATSLGSGNGGRS 1925
                         .||                             .:|.||......||      
pombe   898 -------------HSG-----------------------------LIHNLLLSLKKFGS------ 914

  Fly  1926 TPNSGGGSGSSKSRFNAGNSSNAGSSKSSFLASLNPARWGRQTHQNHHHHHQQSQQQHHGLSKDS 1990
                                    ||..:||.::|..                            
pombe   915 ------------------------SSLRTFLLAMNTC---------------------------- 927

  Fly  1991 GNSNSTGSGSGAGLAYTVSQHGAGSGAGGLNAAAVAASISKSISHANLLAAANRERARQWVREQA 2055
                                                                 .||       :.
pombe   928 -----------------------------------------------------DER-------EV 932

  Fly  2056 VDFVKRYTEQEAKRSKAASESGATQSGSSGVGLSSTGNTPLSTAGSTNVLERLSSILFKLNGSYH 2120
            ::|                                 ||.|            |.|::|       
pombe   933 LEF---------------------------------GNGP------------LVSLIF------- 945

  Fly  2121 DCLDALLELKTILLESDISPFEVNHSGLIKAMLNYMTSETGLVERDARLRSFMHVFAGLPLEPLL 2185
             ||..||        |.:..|                                            
pombe   946 -CLQNLL--------STVENF-------------------------------------------- 957

  Fly  2186 QNVGQMPTIEPIAFGAFVAKLNGCVTQLEQFPVKVHDFPAGPGGRSNQSALRFFNTHQLKCNLQR 2250
                |:.|:.|                                  ..::|:....:.|.|..|..
pombe   958 ----QLSTLPP----------------------------------DTENAVDHVFSRQFKLRLMA 984

  Fly  2251 HPQCNNLRQWKGGTVKIDPLAMVQAIERYL---------------VVRGYGGIR---ADSDDDSE 2297
            .|.......::...|.|:.||.::.::.||               ::|..|.:|   :.|..:|.
pombe   985 LPGSRIRPPFRSLVVSINGLATIRTLDNYLHSRISVRNETGRRFSILREAGSLRESMSGSSRNSS 1049

  Fly  2298 EDMDDNVAAVV-------------LSQASFRHKLQFTIGDHVLPYNMTVYQAVKQFSPLVSEQPE 2349
            .|..|:::...             .:.:.|.....|::....:|.|.|:::.:.::..|..:...
pombe  1050 GDYTDSMSQDAPNHTTEPSERRDSSTSSHFEEHFVFSLMGKKVPRNKTIFRILYEYIQLSDDHTL 1114

  Fly  2350 TDNESETLLGNASIWVQQHTIHYRPVEEEVTSGAAAGAASSSSSCSSGVQKQQSSSSSASSCVNA 2414
            .|           .|.....|.|                                  ....|:  
pombe  1115 DD-----------FWKTPVPIFY----------------------------------GEPDCI-- 1132

  Fly  2415 TSSCSSSSGVASGGGSLTKKAHKSSSKFMRKKTELWHEGIAPVVISALKPFLSSSLPADVVTVQD 2479
                                 |......:..:.|.  ||.:                   :.:::
pombe  1133 ---------------------HNDMKGELNYENET--EGFS-------------------INIRE 1155

  Fly  2480 ASLDALCML----RVIHALNRHWDHLYGCVVRQNIIPQSDFIHPKIMAKANRQLQDPLVIMTGNL 2540
            . ||.|.:|    |.:|.|... .|..|.:  :||:  :||.:.|:.||.||||::..:::.|.|
pombe  1156 I-LDLLSILYYGIRDVHTLFPD-KHFRGNI--ENIL--TDFSNWKLSAKLNRQLEEQQLVVHGCL 1214

  Fly  2541 PQWLPQIGMACPFLFPFETRHLLFYATSFDRDRALQRLLDTTPDLNAAESSERVA-PRLDRRKRA 2604
            |.|...:..|.|||.|||||:||..:|:|...|::..||...|:|:..|||..:. ..|.|:|..
pombe  1215 PSWCISLTSAYPFLVPFETRYLLLQSTAFGLSRSVSFLLSRNPELSKNESSSILQFVSLHRQKIR 1279

  Fly  2605 ISRTEILKQAEHILQDFGHSKALLEIQYENEVGTGLGPTLEFYALVSAELQRTDLGLWNGSDSYK 2669
            |||.:|...|.|:|..:..|:.:|||:||:|||:|||||||||..||.|.....|.:|..     
pombe  1280 ISRKKIFNYALHLLATYAASENILEIEYEDEVGSGLGPTLEFYTSVSKEFTLNSLDIWRN----- 1339

  Fly  2670 QNSVTIVDVVKANSAVLHIEDALEATTTDQNTPAVAGASLVSSSTTTTTTTAQQHQHPPTRSSSR 2734
                                                                             
pombe  1340 ----------------------------------------------------------------- 1339

  Fly  2735 SHVLRSGAGQQPVEHSSSSAGANENALNMVIAQQFSDTNSANPAAIDNPSSTTTATTVVQHNTTT 2799
                                                          |.|:|              
pombe  1340 ----------------------------------------------DQPNS-------------- 1344

  Fly  2800 NNSSIITTTTTTSYVHAVHGLFPLPLGKSSKLPQMTKAKAKFKFLGKFMAKAVMDSRMLDLPFSL 2864
                        .:|:...||||.|:......|:..:..:.|..||:|:|:::.|||::.:.|:.
pombe  1345 ------------KFVYQASGLFPSPIPLLGSSPENERKISLFFALGQFVARSIYDSRIISIQFNP 1397

  Fly  2865 PFYRWLVSEEHSIGLADLMRVAPEVQNTLVRLQDLVRQREYILSDPNIDAMEKTEKIEQLDLDGC 2929
            .|:    :....:.::.:.:|...:.|:|       |..|.::...|....|...|:|       
pombe  1398 LFF----ARNIPLTISSVAKVDKGLANSL-------RYLEKLIPGKNPTNAETDIKLE------- 1444

  Fly  2930 PIADLGLDFVLPGHANIELCRGGRDTPVTVHNLHQYISLVTYWFLIEGVQKQFEALREGFDSVFP 2994
               ||.|||.|||..:|||...|..||||..|:..|::.|..:.:.:|||:|.||.:.||.||||
pombe  1445 ---DLHLDFTLPGFPSIELIPDGASTPVTTFNVSDYLNYVIDYTVGKGVQQQLEAFQNGFSSVFP 1506

  Fly  2995 IQRLRMFYPEELECVFCGSGSEQQHSRWEIKMLQESCRTDHGFHQDSQAIQYLYEILASYNRDEQ 3059
            ...|::....||..:| |:..|.    |....|.:|...|||:..:|..||.|..:::..|..||
pombe  1507 YTSLQVLTEHELVTLF-GTVDED----WSYATLMKSIVADHGYTMESPTIQRLLTLMSQMNFQEQ 1566

  Fly  3060 RAFLQFVTGSPRLPTGGFKALTPPLTIVRKTLDENQNPNDYLPSVMTCVNYLKLPDYSSREVMRQ 3124
            |.||||:|||.:||.|||..|.||||:||:..:....|:||||||||||||||||:|||.||:..
pombe  1567 RDFLQFITGSRKLPIGGFAGLNPPLTVVRRLNEPPYVPDDYLPSVMTCVNYLKLPEYSSSEVLGS 1631

  Fly  3125 KLKVAANEGSMSFHLS 3140
            :|..|..||..|||||
pombe  1632 RLSKAILEGQGSFHLS 1647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669
WWE 1409..1481 CDD:128922 4/71 (6%)
FAM199X <1985..2074 CDD:292442 3/88 (3%)
HECTc <2818..3138 CDD:294058 122/319 (38%)
SPAC12B10.01cNP_594633.2 HECTc 1276..1645 CDD:238033 157/536 (29%)
HECTc 1301..1642 CDD:214523 147/508 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 208 1.000 Domainoid score I617
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 348 1.000 Inparanoid score I487
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004709
OrthoInspector 1 1.000 - - oto101958
orthoMCL 1 0.900 - - OOG6_102181
Panther 1 1.100 - - LDO PTHR45670
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3704
SonicParanoid 1 1.000 - - X3310
TreeFam 1 0.960 - -
1110.940

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