DRSC/TRiP Functional Genomics Resources

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Protein Alignment ctrip and Wwc1

DIOPT Version :9

Sequence 1:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:NP_740749.1 Gene:Wwc1 / 211652 MGIID:2388637 Length:1104 Species:Mus musculus


Alignment Length:700 Identity:143/700 - (20%)
Similarity:248/700 - (35%) Gaps:180/700 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SQSLSALTEGQHDDGGSTATSATLANKTSGTNTTSAS----NHSSQRRRNNNTNSNRNKSHHKNE 67
            |.|:.:|:.|. ..|..|::..:|| .:|..::||||    .:....:.::...|.......:..
Mouse   427 SSSMQSLSSGS-SPGSLTSSRGSLA-ASSLDSSTSASFTDLYYDPFEQLDSELQSKVELLFLEGA 489

  Fly    68 KRNAPATSGPAVSSSVDVVPATSTASATSTRRSRSQGRHSSAAALSSKESQIPKRSVGAIRSPSS 132
            ....|  ||...:...|.|..|..|..    .||.|...|.:....|..|..|:.|   :.|||.
Mouse   490 TGFRP--SGCITTIHEDEVAKTQKAEG----GSRLQALRSLSGTPRSMTSLSPRSS---LSSPSP 545

  Fly   133 PAFNSIPVVSDQSLSPGSRKRQLNQHNNSNNKASSSHQSAPGGDQLVCAPLKKRRLQQSLGSGIC 197
            |.   .|:::|..|:                           ||..: |||:..  ...|.:.:|
Mouse   546 PC---SPLITDPLLT---------------------------GDAFL-APLEFE--DTELSTTLC 577

  Fly   198 EGAVEINLGAASFDHTPRQASGDCVAQRTRSKTISPEELPSTSSAAAARHHQIRPSASSTSFSSS 262
                |:|||            |....:|.|.:...||..|...:|:.|....::.:..|.:.|..
Mouse   578 ----ELNLG------------GSGTQERYRLEEPGPEGKPLGQAASVAPGCGLKVACVSAAVSDE 626

  Fly   263 HRNKRKASIGGSIAAVETTPHR-GTAAARAGRSGN-----------LLNYYRKTR-------KVS 308
                   |:.|.....|.:..| ||:.|.|..|..           .|.|..|.:       ::|
Mouse   627 -------SVAGDSGVYEASAQRPGTSEAAAFDSDESEAVGATRVQIALKYDEKNKQFAILIIQLS 684

  Fly   309 H--TRSSQKSEKQSI-----PAEDTTA---------NRNGSAGSGSSSKSGVIPK-NRKSLR--- 353
            |  ..|.|:.:|.:|     |..:::.         :.|....:.:...|...|. ::|:||   
Mouse   685 HLSALSLQQDQKVNIRVAILPCSESSTCLFRTRPLDSANTLVFNEAFWVSISYPALHQKTLRVDV 749

  Fly   354 ------HSQQNLLDTEAAEVESAAAETGGEQQSEHGNL--------DVIDQLPTPEAGPNQSEA- 403
                  |:::.|   ..|::..|.....||:.:...||        ...:..||...||:..:| 
Mouse   750 CTTDRSHTEECL---GGAQISLAEVCRSGERSTRWYNLLSYKYLKKQCREPQPTEAPGPDHVDAV 811

  Fly   404 SGIHNQSQLEADRQPVVQDED---------DEEDDEEEEEEEEEEVGFYGIVNSAGSSYEED--T 457
            |.:..|:.:|.:::...:...         :||..|.|...||||.|            |||  |
Mouse   812 SALLEQTAVELEKRQEGRSSSQTLEGSWTYEEEASENEAVAEEEEEG------------EEDVFT 864

  Fly   458 QIVAEEDEITTEEEVDDEDDDE--------IEEEDLSESEFAQQLIGELGGERQQPQRATNNAKK 514
            :.|:.|.|.....:||.|.:.:        :..:|           ..:|.....|....|...:
Mouse   865 EKVSPEAEECPALKVDRETNTDSVAPSPTVVRPKD-----------RRVGAPSTGPFLRGNTIIR 918

  Fly   515 TKNNTPAVAAASTIKATTTATTSSGYQQRAAPHGQGAAPGAGGGGPRATRSSNSNS--SNNVVDY 577
            :|..:|...:....:...:.:.||...:: .|..:.:....   ..|..|.|:..|  :..::..
Mouse   919 SKTFSPGPQSQYVCRLNRSDSDSSTLSKK-PPFVRNSLERR---SVRMKRPSSVKSLRTERLIRT 979

  Fly   578 SIMPHLTTVATTTPHALTPQQHQQQRQPPQPPSH-QQQQVHQQQQPPQLL 626
            |:...|...||.|.|:...|:....::..:   | :|.:.|.:::.||.|
Mouse   980 SLDLELDLQATRTWHSQLTQEISVLKELKE---HLEQAKNHGEKELPQWL 1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669
WWE 1409..1481 CDD:128922
FAM199X <1985..2074 CDD:292442
HECTc <2818..3138 CDD:294058
Wwc1NP_740749.1 WW 9..39 CDD:238122
WW 55..84 CDD:278809
ALDH-SF 378..>420 CDD:299846
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 429..449 5/20 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 509..547 13/44 (30%)
C2_Kibra 661..784 CDD:176062 22/125 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 822..949 27/150 (18%)
Interaction with histone H3. /evidence=ECO:0000250 836..1104 44/220 (20%)
Interaction with PRKCZ. /evidence=ECO:0000250 945..988 7/46 (15%)
ADDV motif 1102..1104
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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