DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ctrip and Gas7

DIOPT Version :9

Sequence 1:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:XP_006532265.1 Gene:Gas7 / 14457 MGIID:1202388 Length:476 Species:Mus musculus


Alignment Length:636 Identity:114/636 - (17%)
Similarity:202/636 - (31%) Gaps:251/636 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly  1783 PRQYVH-FQQPAVPAPPPQQE----LLPSG----VQQQGQQVPQVIYQPHHQQPAHLVLASTSSG 1838
            |..||. .::|.:..|||.:|    :||.|    :..||::               ..:.:|::.
Mouse    53 PASYVQLLEKPGMVPPPPGEESQTVILPPGWHSYLSPQGRR---------------YYVNTTTNE 102

  Fly  1839 AASSSSSSSSSSSASALQHKMTDMLKRKAPPKRKSQSGGRAKSRQEDAAVAPAGSGPGGAPPSSS 1903
            ......|||...|||...|       |.:.|  .:.:|..|             ||....||.::
Mouse   103 TTWERPSSSPGISASPGPH-------RSSLP--TTVNGYHA-------------SGTPAHPPETA 145

  Fly  1904 GSAMHELLSRATSLGSGNGGRSTPNSGGGSGSSKSRFNAGNSSNAGSSKSSFLASLNPARWGRQT 1968
                |..|.::|                           |:|.|.|||        :|.|  :|:
Mouse   146 ----HMSLRKST---------------------------GDSQNLGSS--------SPGR--KQS 169

  Fly  1969 HQN--------HHHHHQQSQQQHHGLSKD----------SGNSNSTGSGSGAGLAYTVSQHGAGS 2015
            .:|        ..|.....:||   |.|.          :...:..|:|:.||....:.:...|.
Mouse   170 KENTITINCVTFPHPDTMPEQQ---LLKPTEWSYCDYFWADKKDPQGNGTVAGFELLLQKQLKGK 231

  Fly  2016 GAGGLNAAAVAASISKSISHANLLAAANRERARQWVREQAVDFVKRYTEQEAKRSKAASESGATQ 2080
                        .:.|.:|              :::||: :...:.|.:..||.|:  :...|.:
Mouse   232 ------------QMQKEMS--------------EFIRER-IKIEEEYAKNLAKLSQ--NSLAAQE 267

  Fly  2081 SGSSGVGLSSTGNTPLSTAGSTNVLERLSSILFKLNGSYHDCLDALLELKTILLESDISPFEVNH 2145
            .||.|   .:......|.|....|..:.|:.|                                |
Mouse   268 EGSLG---EAWAQVKKSLADEAEVHLKFSAKL--------------------------------H 297

  Fly  2146 SGLIKAMLNYMTSETGLVERDARLRSFMHVFAGLPLEPLLQNVGQMPTIEPIAFGAFVAKLNGCV 2210
            |.:.|.::|:..:    .::|  ::...|..|.|    ..|...:..::|. |..|...:.....
Mouse   298 SEVEKPLMNFREN----FKKD--MKKCDHHIADL----RKQLASRYASVEK-ARKALTERQKDLE 351

  Fly  2211 TQLEQFPVKVHDFPAGPGGRSNQS-----ALRFFNTHQ----LKC-NLQRHPQCNNLRQWKGGTV 2265
            .:.:|..:|:          ||::     ..|..:|..    ::| :|....|.....:....|:
Mouse   352 MKTQQLEIKL----------SNKTEEDIKKARRKSTQAGDDLMRCVDLYNQAQSKWFEEMVTTTL 406

  Fly  2266 KIDPLAMVQAIERYLVVRGYGGIRADSDDDSEEDMDDNVAAVVLSQASFRHKLQFTIGDHVLP-Y 2329
            :::.|    .:||..::|                               :|..|:|...|... :
Mouse   407 ELERL----EVERVEMIR-------------------------------QHLCQYTQLRHETDMF 436

  Fly  2330 NMTVYQAVKQFSPLVSEQPETDNESETLLGNASIWVQQH-TIHYRPVEEEV 2379
            |.:..:.|.|.  |....|..|.|         :||::| |.:.|||:.|:
Mouse   437 NQSTVEPVDQL--LRKVDPAKDRE---------LWVREHKTGNIRPVDMEI 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669
WWE 1409..1481 CDD:128922
FAM199X <1985..2074 CDD:292442 15/98 (15%)
HECTc <2818..3138 CDD:294058
Gas7XP_006532265.1 SH3_GAS7 5..57 CDD:212763 1/3 (33%)
WW_FCH_linker 109..201 CDD:374680 33/157 (21%)
F-BAR_GAS7 214..446 CDD:153333 53/351 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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