DRSC/TRiP Functional Genomics Resources

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Protein Alignment ctrip and Ufd4

DIOPT Version :10

Sequence 1:NP_649496.3 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:XP_061518162.1 Gene:Ufd4 / 1271399 VectorBaseID:AGAMI1_002817 Length:3192 Species:Anopheles gambiae


Alignment Length:3697 Identity:732/3697 - (19%)
Similarity:1200/3697 - (32%) Gaps:1331/3697 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 HSSAAALSSKESQIPKRSVG---AIRSPSSPAFNSIPVVSDQSL-------SPGSRK-------- 152
            ||:.|.:|...:::......   .:.|.|:...:..|:|:|.:|       ...:||        
Mosquito   165 HSAMAVVSRLCTKVEPSGANVQTCVESLSTLLQHEDPLVADGALKCFASVADRFTRKGVDPAPLA 229

  Fly   153 -----RQLNQHNNSNNKASSSHQSAPGGDQLVCAPLKKRRLQQSLGSGICEGAVEINLGAASFDH 212
                 |:|.|..:          :|.||.|          :..|.|.|  ..|:..:||..|..|
Mosquito   230 EYGLVRELLQRLS----------NAAGGPQ----------ISSSGGGG--SAAISSSLGTNSSTH 272

  Fly   213 TPRQASGDCVAQRTRSKTISPEELPSTSSAAAARHHQIRPSASSTSFSSSHRNKRKASIGGSIAA 277
                                ||..||.:        |:..||..::..:....:...||..:|:.
Mosquito   273 --------------------PESSPSAA--------QLSSSAPKSAQGAMEAGRSSQSIATTISL 309

  Fly   278 VETTPHRGTAAARAGRSGNLLNYYRKTRKVSHTRSSQKSEKQSIPAEDTTA----NRNGSAGSGS 338
            :.|......:........|||....:..|     ..::.....:...|...    ....:.|...
Mosquito   310 LSTLCRGSPSITHDLLRSNLLEAMERAFK-----GDERCVLDCMRLADLILLLLFEGRQALGRVG 369

  Fly   339 SSKSGVIPKNRK---SLRHSQQNLL------DTEAAEVESAAAETGG--------------EQQS 380
            .|:..:.|:.|:   |...:.:.|:      ||||. :||  .|:||              ...|
Mosquito   370 GSQGQLAPRVRRADSSTERTHRQLIDCIRSKDTEAL-IES--IESGGIDVNCMDDVGQTLLNWAS 431

  Fly   381 EHGNLDVIDQLPTPEAGPNQSE-ASGIHNQS----------QLEADRQPVVQDEDDE---EDDEE 431
            ..|.|::::.|....|..|:.: :|.:|..:          .|:....|.::|||.:   :...|
Mosquito   432 AFGTLEMVEFLCDKGADVNKGQRSSSLHYAACFGRPGIAKVLLKHGANPDLRDEDGKTPLDKARE 496

  Fly   432 EEEEEEEEVGFYGIVNSAGSSYEEDTQIVAEEDEITTEEEVDDEDDDEIEEEDLSESEFAQQLIG 496
            ..:|...||.  .|:.|.|     :..:.|...::...:..|:...                 .|
Mosquito   497 RPDEGHREVA--SILQSPG-----EWMMAATRSDVKCGDSGDETGG-----------------AG 537

  Fly   497 ELGGERQQPQRATNNAK-------KTKNNTPAVAAASTIKATTTATTSSGYQQRAAPHGQGAAPG 554
            .:|..|..|:.|....|       ||..:|         ...:...:|.|..::...:.|     
Mosquito   538 GVGEPRGDPEMAPVYLKFFLPTFCKTFQST---------MLASVRRSSLGLIKKMIQYVQ----- 588

  Fly   555 AGGGGPRATRSSNSNSS--------------------NNVVDYSIMPHLTTVATTTPHALTPQQH 599
                 |.......|:..                    :|.:.|| .|.|:..:...|..|.|   
Mosquito   589 -----PEVLSKLCSSEGLQSYEQSLGTLLVEVIASVLDNEISYS-WPPLSQPSAALPAYLPP--- 644

  Fly   600 QQQRQPPQPP-----SHQQQQVHQQQQPPQLLPTHQFA-HLSSFVTPTAAAAAAAAAAHYPPASA 658
               ..||.||     .|....|..     .||..|..| .||.||                    
Mosquito   645 ---LPPPPPPILTVARHSSSSVSH-----SLLTKHSCAERLSKFV-------------------- 681

  Fly   659 AAAYFAQQQHHQHQHQHQQQHVQQAQAPQPHYYHSSVAVLHQPPPHHFTSTGAGPPPALFQQQAP 723
                         |.:.|:::......|                          |||.|.....|
Mosquito   682 -------------QAKRQRRNSSSYIIP--------------------------PPPPLLPLTPP 707

  Fly   724 PQLTRYTPATATTAATFVPPQQQQVVYNPQQQQHSSLRRSS---RGKTGSCVSSAAAAQQQQHHQ 785
            |:.|  |.|.|..:......:........:...:||.|.::   |.:|.|..|..:.|..:.   
Mosquito   708 PRGT--TSARANDSDEDADDEWAGAAAGSKSNNNSSDRTTTTNPRNRTQSNWSDLSIADDED--- 767

  Fly   786 QQQHSSAAAAVQQQLLPPPGTYQYQQVGGNTVVVAVRHQQQLQQQQQQQQQLALHHQHQQQQHQQ 850
                                        |:.||:.:     :|:...:.|...|.|..:...:.:
Mosquito   768 ----------------------------GHLVVLTI-----VQELMSKTQNDFLDHFARLGVYTK 799

  Fly   851 QQQQHQQQQHQQQQRATLVQPGFLFSYRSNQPQQQQQPAQQIHQGPKVTHSSAASDALTYSLMAQ 915
            .|             |.:.:|.|..|..::..:.....|:           |||:.|.       
Mosquito   800 VQ-------------ALMGEPSFDGSDNNDVIKSTSDDAK-----------SAAAAAC------- 833

  Fly   916 QPPSGPPHAGGQQITPGA---NSANLSIVAAAL-------------------------------- 945
               |....:|...:||||   .:|:....:||:                                
Mosquito   834 ---SSTDASGVVTVTPGAPTVTTASGGTASAAVAVEDAKEILHGKAYHWHDWSICRGRDCLYVWS 895

  Fly   946 -SAARDVGGGSDG------GGSAGGATPATGASASSVGNTSAVGASSSSNSSAGQAASSNSNNVT 1003
             |||.::..||:|      .|..     ||..|:.|..|        .|:|:..:..||:.|...
Mosquito   896 DSAALELSNGSNGWFRFILDGKL-----ATMYSSGSPEN--------GSDSTGREKVSSDPNVPN 947

  Fly  1004 ATGSGS-----APGGGPTSTGTTSGTQHGSGSGAAAAVD--------------SESDDSEVGRLQ 1049
            ....|.     .........||.|.....:.|.|..||.              :.|:..:|..||
Mosquito   948 EENRGEFLEKLQRARAAVRQGTVSQPILSAPSLARIAVGNWVLQSQKEHQLHINNSEGHQVTILQ 1012

  Fly  1050 -----ALLEARGLPPHLFGA---LGPRVT----------------------HILHRTIGN----- 1079
                 .:.|:.....|.|.|   |||...                      |.|.|.:.|     
Mosquito  1013 DELPGFIFESNRGTKHTFTAETTLGPDFAAGWINTKKKKMRCKAEAQKYQLHKLARDLYNRYFKA 1077

  Fly  1080 ------SSSSKANQLLQGLQSHDESQQ----------------------------LQAAIEMCQM 1110
                  .:.:|.::::..::...|.||                            ..|..|:..:
Mosquito  1078 AQAIPRGAVAKLSKIVHQIEIALEEQQSTSKAALISSTTQQITPPSAGVSWQEKLYNALTELVHL 1142

  Fly  1111 LVMGNED-TLAGFPI--KQVVPALIQLLRMEHNFDIMNNACRALAYMLEAL-------------- 1158
            |   ||| .::.:.:  ..:|.||:.:|...: :|:..|..:|..|..:.|              
Mosquito  1143 L---NEDGVISAYEMYSSGLVQALVAVLSPNY-WDLGMNRTKANKYQKQRLSIFKKCMYGGELKT 1203

  Fly  1159 -PRSSGTVVEAVPVFLEKLQVIQC-MDVAEQSLSALEILSRRHNKAILQANGISAC-LTYLDFFS 1220
             ..::..:|:.:...||.::.:.. |..:......|:||:::.:..:.:|    || .|..|...
Mosquito  1204 GKNTAAILVQKLVAVLESIEKLPVYMYDSPGGSYGLQILTKKLSFRLERA----ACEQTLFDRTG 1264

  Fly  1221 IVAQRAALAIAANC---CLNMHPEEFHFVAESLPLLARLLSQ----------------------- 1259
            ...:...||...:.   .|.|..::::.:..|..|..|.:.:                       
Mosquito  1265 RNLKMEPLATVGHLNKYLLKMVAKQWYDMERSSFLYLRKMKEAKSGTMQFRHRHDFDENGLIYYI 1329

  Fly  1260 -QDKKCIESVCSAFCRLVESFQHDGQ-----RLQQIASPDLLK-NCQQLLLVTPAILNTGTFTAV 1317
             .:.:.:|.|..|...||.....:|:     :|:.|.|.|.:. ||.       ...|..::.|:
Mosquito  1330 GTNGRTLEWVNPAQYGLVTVTSSEGKQLPYGKLEDILSRDSVSVNCH-------TKDNKKSWFAI 1387

  Fly  1318 VRMLSLMCCSCPDLAI-----------------SLLRNDI------AATLLYLLTGN-----AEP 1354
                        ||.|                 |.|||.:      ..:.:.|||..     |||
Mosquito  1388 ------------DLGIFILPTAYTLRHARGYGRSALRNWLFQMSKDGVSWVTLLTHTDDKSLAEP 1440

  Fly  1355 A----------------------------AASATHVELISRSPSELYELTCLIGELMPRLPLDGI 1391
            .                            |:..||  .:|.|..|:|      |::|        
Mosquito  1441 GSTCTWPIDCPADEQQGYRHVRIHQNGRNASGQTH--YLSLSGFEIY------GKVM-------- 1489

  Fly  1392 FAVDSLLDRPTLNTQDQVHWQWRDDRGSWHNYSTIDSRLIEAANQSSEDEISLSTFGRTYTVDFH 1456
             :|...:|:......:....:.|....|...|.|..:|::...:...:|:........|...:.|
Mosquito  1490 -SVCEDMDKTAAKENEAKLRKERRQIRSQLKYITDGARVVRGVDWHWDDQDGSPPGEGTVIAEIH 1553

  Fly  1457 -AMQQINEDTGTTRPVQRRLNHNYVAPMSAGQDLTTTSAGSAAAGGASTSAAAAAASSNNNNNNN 1520
             ....:..|.|        :.::|........||...:.....|||....::..:.::.....||
Mosquito  1554 NGWIDVKWDHG--------MRNSYRMGAEGKYDLKLANVDGLMAGGYDLHSSGISVTTAGGGANN 1610

  Fly  1521 NNPPGNSVNLNQVKRRPSLDARIACLKEERGLAADFIKHIF----NVLYEVYSSS---------- 1571
            |              :.:..|.:.|...:.|..|...|.::    |||....|||          
Mosquito  1611 N--------------QFASTANVQCELADGGSTASGKKKVYDKSLNVLTSRKSSSTPSLPDATTE 1661

  Fly  1572 ------------AGPNVRYKCLRALLRMVYYATPELLRQVLKYQLVSSHIAGMLGSNDLRIVV-- 1622
                        :..|:.:|      :.|...|..:|... :..|.:....|  .||||...|  
Mosquito  1662 NRSSVASTEQATSADNLSWK------QAVEVITENVLSSA-RSDLATVGSGG--SSNDLSSSVVT 1717

  Fly  1623 ------GALQMAEILM--------RQLPDVFGTHFRREGVIYQFTQLTDPNNPICANPSPKPLSA 1673
                  |..|...:.:        ..:||:...:.....::.....:|:  |...::.|.|   .
Mosquito  1718 SSTATTGNNQEVSVTVHSSLSERGNNIPDLSQINSSTSMLVSDLATITE--NLSLSDGSAK---Q 1777

  Fly  1674 TATPTANAGGSQSAPASANSLQVNPFFMDSAPGLSSASTTPSSSKHQSYSVKSFSHAMNALTASA 1738
            :.|.||::.|.|...::.:...| |..|.|:...||:|:|..::|  :.::...::.:| ||:. 
Mosquito  1778 SGTATASSAGGQQFVSNISGTGV-PVLMGSSSSSSSSSSTEENNK--TNNINETNNKIN-LTSG- 1837

  Fly  1739 KGTPSGALDATSSSTTAGGYNYSSSAPSSSSGAPAAYFVTQ---QGDPRQYVHFQQP-------- 1792
                |||      |:.|.|    |||.|..:|  .:|..|:   .|..|:.|...:.        
Mosquito  1838 ----SGA------SSVASG----SSASSGKAG--LSYLQTRLDMMGKMREGVDMLRNNTNNFLSS 1886

  Fly  1793 --------------AVPAPPPQQELLPSGVQQQGQQVP-QVIYQPHHQQPAHLVLASTSSG---A 1839
                          |.|..||......|........:| ...|      .:.:.:||||:|   |
Mosquito  1887 ELLTQSNLLSSVKIAFPPIPPANATTGSSSSTTATTIPGSASY------GSSIFVASTSTGTNPA 1945

  Fly  1840 ASSSSSS-----------SSSSSASALQHKMTDMLKR------KAPPKRKSQSGGRAKSRQEDAA 1887
            |||.:.:           :::::|:..: |:.:..|:      .|||...|..|||..:......
Mosquito  1946 ASSGTGAKTPTDKFDVKFNNTATANTFK-KVLNEAKQIGAEQPPAPPAPASSMGGRDATNNLKNN 2009

  Fly  1888 VAPAGSGPGGAPPSSSGSAMHELLSRATSLGSGNGGRST---PNS-----GGGSGS--------- 1935
            :...||                  :..|.||.|.||.|:   ||:     |..|||         
Mosquito  2010 IVVVGS------------------TETTVLGGGGGGGSSQDDPNAMDCLMGSVSGSDGVNVVPVV 2056

  Fly  1936 --SKSRFNAG----NSSNAGSSKSSFLASLNPARWGRQTHQNHHHHHQQSQQQHHGLSKDS---- 1990
              |.:..:..    .||..|::..|..||       .:|..:|||||.........|:.|:    
Mosquito  2057 APSPNSMSVSVPNLTSSGTGANNHSHNAS-------HRTSSHHHHHHNHPDSASQTLANDAQPPP 2114

  Fly  1991 -------------------GNSNSTGS----------------------------------GSGA 2002
                               .||||..:                                  .|||
Mosquito  2115 PGLLETFAAIARRRTSGSGSNSNSNANNNNENNNAASHPSSSSSSSSQQTTAAVPINNQLISSGA 2179

  Fly  2003 GLAYTVSQHGAGSGAGGL------------NAAAVAASISKSISHANLLAAANRERARQWVREQA 2055
            |..       .|.|.||:            |:......::.| ||..||:.|.            
Mosquito  2180 GAL-------VGGGGGGVLQNNSNFFPRGPNSVTSLVKLALS-SHTGLLSTAQ------------ 2224

  Fly  2056 VDFVKRYTEQEAKRSKAASESGATQSGSSGVGLSSTGNTPLSTAGSTNVLERLS-SILFKLNGSY 2119
             .:...::......:.|...:|...:.::.||:...  .||:.|.:.::....| |....|....
Mosquito  2225 -SYPSLFSSSSNNNAAAGQGAGNNNNANNMVGVGQV--NPLNPALTMSLTSTSSDSEQVSLEDFL 2286

  Fly  2120 HDC-----LDALLELKTILLESDISPFEVNHSGLIKAMLNYMTSETGLVERDARLRSFMHVFAGL 2179
            ..|     |..|.:.:.|..|:|....|..:..:...:|..|.|.        .|.|||.     
Mosquito  2287 EQCRAPTLLGDLEDDEDIEDENDDDENEDEYEEVGNTLLQVMVSR--------NLLSFME----- 2338

  Fly  2180 PLEPLLQNVGQMPTIEPIAFG-------AFVAK--LNGCVTQLEQFPVKVH-------DFPAGPG 2228
              |...:|  ::||.     |       .||.|  .:..:...:..|.|.:       |.|| ||
Mosquito  2339 --ERTFEN--RLPTA-----GKRKSWDDEFVLKRQFSALIPAFDPRPGKTNVNQTSDLDIPA-PG 2393

  Fly  2229 GRSNQSALRFFNTHQLKCNLQRHPQCNNLRQWKGGTVKIDP--------LAMVQAIERYLVVRG- 2284
            ..|....     |.|        ||.::    .|.....:|        ::.:......|::|| 
Mosquito  2394 SNSATDP-----TEQ--------PQSSS----SGRGALPEPGSGQSSTAISSLPQPTLSLILRGP 2441

  Fly  2285 -YGGIRADSDDDSEEDMDDNVAAVVLSQASFRHKLQFTIGDHVLPYNMTVYQAVKQFSPLVSEQP 2348
             ..|:     :|.|.|         |:|:.:                 |:::||::.. |.:..|
Mosquito  2442 NINGV-----NDVEVD---------LTQSDW-----------------TIFRAVQELM-LQTTMP 2474

  Fly  2349 ETDNESETLLGNASIWVQQHTIHYRPV-------------EEEVTSGAAAGAASSSSSCSSGVQK 2400
            :.|...:       ||...:||.||..             :|:.:||....|....|..|   |:
Mosquito  2475 KQDKFRK-------IWQPTYTIIYREASPGSSSSLLGGGGKEDFSSGEEGRATPIISMYS---QR 2529

  Fly  2401 QQSSSSSASSCVNATSSCSSSSGV----ASGGGSLTKKAHKSSSKFMRKKTELWHEGIAPVVISA 2461
            ...|:.|.||.|..|.|.|...|.    ||.||:|:.......::..:::               
Mosquito  2530 SHGSTLSPSSPVPGTPSLSGGGGAGGTGASSGGALSSAPGTGGNQQQQQQ--------------- 2579

  Fly  2462 LKPFLSSSLPADVVTVQDASLDALCMLRVIHALNRHWDHLYGCVVR--QNIIP--QSDFIHP--- 2519
                        ..:|:|       :|:::..||.....|......  :|::|  :|.::.|   
Mosquito  2580 ------------YCSVED-------VLQLLSQLNSINQSLAATPTNNDKNLMPDVESHYLSPDVF 2625

  Fly  2520 ---KIMAKANRQLQDPLVIMTGNLPQWLPQIGMACPFLFPFETRHLLFYATSF-----------D 2570
               ||..|..:|:|||||:.:|:||:|..:....||||||||||.|.|..|:|           .
Mosquito  2626 MSKKITNKLQQQIQDPLVLSSGSLPKWCEEYNQTCPFLFPFETRQLYFSCTAFGASRSIVWLQSQ 2690

  Fly  2571 RDRALQRLLDTTPDLNA--AESSERVAPRLDRRKRAISRTE-ILKQAEHILQDFGHSKALLEIQY 2632
            ||.:|:|  ...|.|:.  |:..|....||...:..:.|.| :|..|:.:::...:.|::||:::
Mosquito  2691 RDVSLER--QRAPGLSPRHADQQEFRVGRLKHERVKVPRGENLLDWAQQVMKVHCNRKSVLEVEF 2753

  Fly  2633 ENEVGTGLGPTLEFYALVSAELQRTDLGLWNGSDSYKQNSVTIVDVVKANSAVLHIEDALEATTT 2697
            ..|.||||||||||||||:|||||:|||:|...|...:                .|||.::.   
Mosquito  2754 VGEEGTGLGPTLEFYALVAAELQRSDLGMWLCDDEEPK----------------LIEDEIDL--- 2799

  Fly  2698 DQNTPAVAGASLVSSSTTTTTTTAQQHQHPPTRSSSRSHVLRSGAGQQPVEHSSSSAGANENALN 2762
                                                       |.|.:||.:             
Mosquito  2800 -------------------------------------------GEGSKPVGY------------- 2808

  Fly  2763 MVIAQQFSDTNSANPAAIDNPSSTTTATTVVQHNTTTNNSSIITTTTTTSYVHAVHGLFPLPLGK 2827
                                                              ||....||||.||.:
Mosquito  2809 --------------------------------------------------YVRRSTGLFPAPLPQ 2823

  Fly  2828 SSKLPQMTKAKAKFKFLGKFMAKAVMDSRMLDLPFSLPFYRWLVSEEHSI--------------- 2877
            .|.:.:  .....|.|||.|:||.:.|:|::|||.|..|.: |:|...|:               
Mosquito  2824 DSDISE--DVSGYFWFLGVFLAKVLQDNRLVDLPLSNSFLQ-LLSHSRSMARGATSQTGSLLGKS 2885

  Fly  2878 GLAD--------------------------------------------LMRVAPEVQNTLVRLQD 2898
            |::|                                            |..:.|.....|..||:
Mosquito  2886 GVSDDIMMSSILSEDSDRDRDLLVDSYQSKMAMASDGAWYDGILTQENLQEIDPIRYQFLRELQE 2950

  Fly  2899 LVRQREYILSDPNIDAMEKTEKIEQLDLD---GC-PIADLGLDFV-LP-----GHANIELCRGGR 2953
            ||:|::.|..:..:.:.||.::|.:|.|:   || .:.||.|.|. ||     |:|:.:|...|.
Mosquito  2951 LVQQKQAIEQNDALSSEEKLQQISELKLNTKTGCVALEDLALTFTYLPSSRNYGYASADLLPNGA 3015

  Fly  2954 DTPVTVHNLHQYISLVTYWFLIEGVQKQFEALREGFDSVFPIQRLRMFYPEELECVFCGSGSEQQ 3018
            :..||::|:.:|.:|...:.|.||:.||..|...||..||.:.:|..|.|:|:..:.||    :|
Mosquito  3016 NIDVTINNVEEYCNLTVAFCLQEGIAKQLAAFHRGFCEVFALNKLAAFTPDEIRKMLCG----EQ 3076

  Fly  3019 HSRWEIKMLQESCRTDHGFHQDSQAIQYLYEILASYNRDEQRAFLQFVTGSPRLPTGGFKALTPP 3083
            :..|..:.:........|:.::|........:|...|..|::|||||.||...||.||...|.|.
Mosquito  3077 NPEWTREDIMTYTEPKLGYTKESPGFLRFVNVLMGMNGSERKAFLQFTTGCSSLPPGGLANLHPR 3141

  Fly  3084 LTIVRKTLDENQNPNDYLPSVMTCVNYLKLPDYSSREVMRQKLKVAANEGSMSFHLS 3140
            ||:||| :|..:..   .|||.|||:|||||||.:.:::|::|..|..|  ..|||:
Mosquito  3142 LTVVRK-VDAGEGS---YPSVNTCVHYLKLPDYPNEQILRERLLTATKE--KGFHLN 3192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_649496.3 Extensin_2 <688..731 CDD:252669 7/42 (17%)
SRP1 1087..>1312 CDD:227396 50/305 (16%)
WWE 1409..1481 CDD:128922 11/72 (15%)
HECTc <2818..3138 CDD:474882 116/388 (30%)
Ufd4XP_061518162.1 None

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