DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ctrip and Ubr5

DIOPT Version :9

Sequence 1:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:XP_038936091.1 Gene:Ubr5 / 117060 RGDID:621236 Length:2798 Species:Rattus norvegicus


Alignment Length:3595 Identity:605/3595 - (16%)
Similarity:1050/3595 - (29%) Gaps:1331/3595 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SVKSQSLSALTEGQHDDGGSTATSATLANKTSGTNTTSASNHSSQRRRNNNTNSNRNKSHHKNEK 68
            ||:...|. |.:..::||..       .|.:|||..||        |....::|....|..:...
  Rat    73 SVQPDRLE-LGKPDNNDGSK-------LNSSSGTGRTS--------RPGRTSDSPWFLSGSETLG 121

  Fly    69 RNAPATSGPAVSSSVDVVPATSTASATSTRRSRSQGRHSSAAALSSKESQIPK----RSVGAIRS 129
            |.|..|.|...||.|            ......|.||.|:.|..|.:::::.:    |..|.:.|
  Rat   122 RLAGNTLGSRWSSGV------------GGSGGGSSGRSSAGARDSRRQTRVIRTGRDRGSGLLGS 174

  Fly   130 PSSPAFNSIP--VVSDQSLSPG-------SRK---RQLNQHNNS-----NNKASSSHQSAPGGDQ 177
            ...|.   ||  |:.::.:|..       ||.   |:|.:.|..     ||..|...:....||.
  Rat   175 QPQPV---IPASVIPEELISQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLLSRDDEDGDDGDD 236

  Fly   178 LVCAPLKKRRLQQSLGSGICEGAVEINLGAASFDHTPRQASGDCVAQRTRSKTISP-EELPSTSS 241
                                                            |.|::..| |:|.|...
  Rat   237 ------------------------------------------------TASESYLPGEDLMSLLD 253

  Fly   242 AAAARHHQIRPSA---SSTSFSSSHRNKRKASIGGSIAAVETTPHRGTAAARAGRSGNLLNYYRK 303
            |..   |...||.   :...||.            .|:.......|.::.:|.|.|..||     
  Rat   254 ADI---HSAHPSVIIDADAMFSE------------DISYFGYPSFRRSSLSRLGSSRVLL----- 298

  Fly   304 TRKVSHTRSSQKSEKQSIPAEDTTANRNGSAGSGSSSKSGVIPKNRKS-LRHSQQNLLDTEAAEV 367
                             :|.|                :...:.:.|:| ||..::..||..:.:.
  Rat   299 -----------------LPLE----------------RDSELLRERESVLRLRERRWLDGASFDN 330

  Fly   368 ESAAAETGGEQQSEHGNLDVIDQLPT---------PE--------AGPNQSEASGIHNQSQLEAD 415
            |..:....||...:..|..|  |.|.         |:        .|...||...:.::.:|...
  Rat   331 ERGSTSKEGEPNPDKKNTPV--QSPVSLGEDLQWWPDKDGTKFTCIGALYSELVAVSSKGELYQW 393

  Fly   416 RQPVVQDEDDEEDDEEEEEEEEEEVGFYGIVN------SAGSSYEEDTQIVAEEDEITTEEEVDD 474
            :    ..|.:...:.:..........|.|:.|      ||.|.   ...:..|.:::.|..    
  Rat   394 K----WTESEPYRNAQNPSLHHPRATFLGLTNEKIVLLSANSI---RATVATENNKVATWV---- 447

  Fly   475 EDDDEIEEEDLSESEFAQQLIGELGGER---------------------------QQPQRATNNA 512
               ||......|:.|...|...||.|||                           .|.::....|
  Rat   448 ---DETLSSVASKLEHTAQTYSELQGERIVSLHCCALYTCAQLENNLYWWGVVPFSQRKKMLEKA 509

  Fly   513 KKTKNNTPAVAAASTIKATTTATTSSGYQQRAAPHGQGAAPGAGGGGPRATRSSNSNSSNNVVDY 577
             :.||..|..:|..:.....|..|....:.....|....|.....|.|:.          .|:..
  Rat   510 -RAKNKKPKSSAGISSMPNITVGTQVCLRNNPLYHAGAVAFSISAGIPKV----------GVLME 563

  Fly   578 SI--MPHLTTVATTTPHALTPQQHQQQRQPPQPPSHQQQQVHQQQQPPQLLPTHQFAHLSSFVTP 640
            |:  |.........:|.:|...:...:....:|.|.|:....:...||....|          ..
  Rat   564 SVWNMNDSCRFQLRSPESLKSMEKASKTIETKPESKQEPVKTEMGPPPSPAST----------CS 618

  Fly   641 TAAAAAAAAAAHYPPASAAAAYFAQQQHHQHQHQHQQ----QHVQQAQAPQPHYYHSSVAVLHQP 701
            .|::.|::|:..|....:..|...:::.::.|...::    :.|:.....:......:...:..|
  Rat   619 DASSIASSASMPYKRRRSTPAPKEEEKVNEEQWSLREVVFVEDVKNVPVGKVLKVDGAYVAVKFP 683

  Fly   702 PPHHFTS--TGAGP---PPALFQQQAPPQLTRY--TPATATTAATFVPPQQQQV---VYNPQQQQ 756
            .....|:  ..:||   |.:|.|.   .:|.|.  .....|.....||...|:.   :..|::.:
  Rat   684 GTSSNTNCQNSSGPDADPSSLLQD---CRLLRIDELQVVKTGGTPKVPDCFQRTPKKLCIPEKTE 745

  Fly   757 HSSLRRSSRG-----KTGS----CVSSAAAAQQQQHHQ----------QQQHSSAAAAVQQQL-- 800
            ..::...|:|     |||:    |:...|..:.:|.:.          |.:.|.|.....|:.  
  Rat   746 ILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPTSSVAFLGQNERSVAIFTAGQESPI 810

  Fly   801 ---------------------------LPP-----PGTYQYQQVGGNT--------VVVAVRHQQ 825
                                       |||     .|.:....:..|:        :::||..|.
  Rat   811 ILRDGNGTIYPMAKDCMGGIRDPDWLDLPPISSLGMGVHSLINLPANSTIKKKAAIIIMAVEKQT 875

  Fly   826 QLQQQQQQQQQLALHHQHQQQQHQQQQQQHQQQQ----HQQQQRATLVQPGFLFSY-RSNQPQQQ 885
            .:|...:...:....:....:|....:|..|..|    |:......::.......: .||:..::
  Rat   876 LMQHILRCDYEACRQYLVNLEQAVVLEQNLQMLQTFISHRCDGNRNILHACVSVCFPTSNKETKE 940

  Fly   886 QQPAQQIHQGPKVTHSSAASDALTYSLMAQQPPSGPPHAGGQQITPGANSANLSIVAAALSAARD 950
            ::.|::..:.......||                                  :..:|.|:|....
  Rat   941 EEEAERSERNTFAERLSA----------------------------------VEAIANAISVVSS 971

  Fly   951 VGGGSDGGGSAGGA-----TPATGASASSVGNTSAVGASSSSNSSAGQ----------------- 993
            .|.|:..|.|:..:     .......|:.:|...| |||||.:.....                 
  Rat   972 NGPGNRAGSSSSRSLRLREMMRRSLRAAGLGRHEA-GASSSDHQDPVSPPIAPPSWVPDPPSMDP 1035

  Fly   994 --------AASSNSNNVTATGSGSAPGGGPTSTGTTSGTQHGSGSGAAAAVDSESD--------- 1041
                    |.:..|....|||.|..|     ||.|..|.     |...:.|:|:..         
  Rat  1036 DGDIDFILAPAVGSLTTAATGGGQGP-----STSTIPGP-----STEPSVVESKDRKANAHFILK 1090

  Fly  1042 ---DSEVGR--LQALL---EARGLPPHLFGALG---PRVTHILHRTIGNSSSSKANQLLQGLQSH 1095
               ||.|.:  |:.||   :|||:.|.:....|   |....||         ..|.::.:...|.
  Rat  1091 LLCDSAVLQPYLRELLSAKDARGMTPFMSAVSGRAYPAAITIL---------ETAQKIAKAEVSG 1146

  Fly  1096 DESQQLQAAIEMCQMLVMGNEDTLAGFPIKQVVPALIQLLRMEHNFDIMNNACRALAYMLEALPR 1160
            .|.:                ||...|    .|.|                               
  Rat  1147 SEKE----------------EDVFMG----MVCP------------------------------- 1160

  Fly  1161 SSGTVVEAVPVFLEKLQVIQCMDVAEQSLSALEILSRRHNKAILQANGISACLTYLDFFSIVAQR 1225
             |||..:..|::     |:.|.|....:.:..|.:::                   |.|..   |
  Rat  1161 -SGTNPDDSPLY-----VLCCNDTCSFTWTGAEHINQ-------------------DIFEC---R 1197

  Fly  1226 AALAIAANCCLNMHPEEFHFVAESLPLLARLLSQQDKKCIESVCSAFCRLVESFQHDGQ--RLQQ 1288
            ....:.:.||                            |.|  |:..|       |.|.  :|::
  Rat  1198 TCGLLESLCC----------------------------CTE--CARVC-------HKGHDCKLKR 1225

  Fly  1289 IASPDLLKNCQQLLLVTPAILNTGTFTAVVRMLSLMCCSCPDLAISLLRNDIAATLLY-LLTGNA 1352
             .||....:|.:.                        |.|..|...  :......||| |||   
  Rat  1226 -TSPTAYCDCWEK------------------------CKCKTLIAG--QKSARLDLLYRLLT--- 1260

  Fly  1353 EPAAASATHVELISRSPSELYELTCLIGELMPRLPLDGIFAVDSLLDRPTLNTQDQVHWQW---- 1413
                  ||::..:..|..|         .|:       :|.|.      |:..|...|.|:    
  Rat  1261 ------ATNLVTLPNSRGE---------HLL-------LFLVQ------TVARQTVEHCQYRPPR 1297

  Fly  1414 -RDDRG-------------------------------SWHNYSTIDSRLIEAANQSSEDEISLST 1446
             |:||.                               .|:...:    :|...:|.::|.:|.|:
  Rat  1298 IREDRNRKTASPDDSDMPDHDLEPPRFAQLALERVLQDWNALRS----MIMFGSQENKDPLSASS 1358

  Fly  1447 -FGRTYTVDFHAMQQ----INEDTGTTRPVQRRLNHNYVAPMSAGQDLTTTSAGSAAAGGASTSA 1506
             .|       |.:.:    :|:.:||.|  .....|..:...:|...|..|..|:..        
  Rat  1359 RIG-------HLLPEEQVYLNQQSGTIR--LDCFTHCLIVKCTADILLLDTLLGTLV-------- 1406

  Fly  1507 AAAAASSNNNNNNNNNPPGNSVNLNQVKRRPSLDARIACLKEERGLAADFIKHIFNVLYEVYSSS 1571
                     ....|...||        :|..::...:..|:.        :..:|.:|....:||
  Rat  1407 ---------KELQNKYTPG--------RREEAIAVTMRFLRS--------VARVFVILSVEMASS 1446

  Fly  1572 AG-----PNVRYKCLRALLRMVYYATPELLRQVLKYQLVSSHIAGMLGSNDLRIVVGALQMAEIL 1631
            ..     |....||.|....::.||..||                             ..:||.|
  Rat  1447 KKKNNFIPQPIGKCKRVFQALLPYAVEEL-----------------------------CNVAESL 1482

  Fly  1632 MRQLPDVFGTHFRREGVIYQFTQLTDPNNPICANPSPKPLSATATPTANAGGSQSAPASANSLQV 1696
            :..:         |.|:                          |.|||                 
  Rat  1483 IVPV---------RMGI--------------------------ARPTA----------------- 1495

  Fly  1697 NPFFMDSAPGLSSASTTPSSSKHQSYSVKSFSHAMNALTASAKGTPSGALDATSSSTTAGGYNYS 1761
             ||      .|:|.|........:.:||:....                             ..|
  Rat  1496 -PF------TLASTSIDAMQGSEELFSVEPLPP-----------------------------RPS 1524

  Fly  1762 SSAPSSSSGAPAAYFVTQQGDPRQ-YVHFQQPAVPAPPPQQELLPSGVQQ-------QGQQVPQV 1818
            |...||||.:.::|.:.   :|:| .:...||.......|.:::.:.|::       .|::    
  Rat  1525 SDQSSSSSQSQSSYIIR---NPQQRRISQSQPVRGREEEQDDIVSADVEEVEVVEGVAGEE---- 1582

  Fly  1819 IYQPHHQQPAHLVLASTSSGAASSSSSSSSSSSASALQHKMTDMLKRKAPPKRKSQSGGRAKSRQ 1883
              ..|.:|..|     ....|.:...........|.::   .|:|   |..:.:|.|... .|.|
  Rat  1583 --DHHDEQEEH-----GEENAEAEGHHDEHDEDGSDME---LDLL---AAAETESDSESN-HSNQ 1633

  Fly  1884 EDAAVAPAGSGPGGAPPSSSGSAMHELLSRATSLGSGNGGRSTPNSGGGSGSSKSRFNAGNSSNA 1948
            ::|                  |....:::.||: ||..|..|.|   .......|:.|..:.|::
  Rat  1634 DNA------------------SGRRSVVTAATA-GSEAGASSVP---AFFSEDDSQSNDSSDSDS 1676

  Fly  1949 GSSKS------SFLASLNPARWGRQTHQNHHHHHQQSQQ------QHHGLSKDSGNSNSTGSGSG 2001
            .||:|      :|:......|....:|.|......:|.|      ||...:..:.:|.||.:.|.
  Rat  1677 SSSQSDDIEQETFMLDEPLERTTNSSHANGAAQAPRSMQWAVRNTQHQRAASTAPSSTSTPAASS 1741

  Fly  2002 AGLAYTVSQHGAGSGAGGLNAAAVAASISKSISHANLLAAANRERARQWVREQAVD---FVKRYT 2063
            |||.|....:...||....:|||.||::..|.:.:.|.:|::..||...|..|..|   .:.:|.
  Rat  1742 AGLIYIDPSNLRRSGTISTSAAAAAAALEASNASSYLTSASSLARAYSIVIRQISDLMGLIPKYN 1806

  Fly  2064 EQEAKRSKAASESGATQSGSSGVGLSS--------TGNTPLSTAGSTNVLERLSSILFKLNGSYH 2120
            .....:..||    ...:....|.|.:        |.|..:|...||....|..|.|.......|
  Rat  1807 HLVYSQIPAA----VKLTYQDAVNLQNYVEEKLIPTWNWMVSIMDSTEAQLRYGSALASAGDPGH 1867

  Fly  2121 DCLDALLELKTILLESDISPFEVNHSGLIKAMLNYMTS--ETGLVERDARLRSFMHVFAGLPLEP 2183
                               |....|:....|....||:  |..|...:.|.|:.:          
  Rat  1868 -------------------PNHPLHASQNSARRERMTAREEASLRTLEGRRRATL---------- 1903

  Fly  2184 LLQNVGQMPTIEPIAFGAFVAKLNGCVTQLEQFPVKVHDFPAGPGGRSNQSALRFFNTHQLK--- 2245
            |....|.|.     |.|.|:                             ..||....:|..:   
  Rat  1904 LSARQGMMS-----ARGDFL-----------------------------NYALSLMRSHNDEHSD 1934

  Fly  2246 -------CNLQRHPQC-NNLRQW---KGGTVKIDPLAMVQAIERYLVVRGYGGIRADSDDDSEED 2299
                   |:|:..... ..|..|   ......:|...:.:...|.|:..|     .|::|...|:
  Rat  1935 VLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTPQLERKRTRELLELG-----IDNEDSEHEN 1994

  Fly  2300 MDDNVAAVVLSQAS--------------FRHKLQFTIGDHV--LPYNMTVYQAVKQFSPLVSEQP 2348
            .||...:..|:...              ||.....|....:  .|:.:.:.:|:    || ::||
  Rat  1995 DDDTSQSATLNDKDDESLPAETGQNHPFFRRSDSMTFLGCIPPNPFEVPLAEAI----PL-ADQP 2054

  Fly  2349 ---ETDNESETLLGNASIWVQQHTIHYRPVEEEVTSGAAAG----AASSSSSCSSGVQKQQSSSS 2406
               :.:...|.|.|             ||.:...:|.|.:|    ..:...:|...:..:.|.::
  Rat  2055 HLLQPNARKEDLFG-------------RPSQGLYSSSAGSGKCLVEVTMDRNCLEVLPTKMSYAA 2106

  Fly  2407 SASSCVNATSSCSSSSGVASGGGSLTKKAHKSSSKFMRKKTELWHEGIAPVVISALKPFLSSSLP 2471
            :..:.:|..:.              .|||.:..| .:.::.:....|.:...::|.   |.|||.
  Rat  2107 NLKNVMNMQNR--------------QKKAGEDQS-MLAEEADSSKPGPSAHDVAAQ---LKSSLL 2153

  Fly  2472 ADVVTVQDASLDALCMLRVIHALNRHWDHLYGCVVRQNIIPQSDFI-----HPKIMAKANRQLQ- 2530
            |: :.:.::....|...|                      ||..|:     |..::.:....|: 
  Rat  2154 AE-IGLTESEGPPLTSFR----------------------PQCSFMGMVISHDMLLGRWRLSLEL 2195

  Fly  2531 -----------DPLVIMTGNLPQWLPQIGMACPFLFPFETRHLLFYATSFDRDRALQRLLDTTPD 2584
                       :|..|:|        ::|       .||.:...|       .|.:::|.:    
  Rat  2196 FGRVFMEDVGAEPGSILT--------ELG-------GFEVKESKF-------RREMEKLRN---- 2234

  Fly  2585 LNAAESSERVAPRLDRRKRAISRTEILKQAEHILQD-FGHSKAL-------LEIQYENEVGTGLG 2641
                :.|..::..:||     .|..:::|....|.: ||...|.       :::.:::|.|.|.|
  Rat  2235 ----QQSRDLSLEVDR-----DRDLLIQQTMRQLNNHFGRRCATTPMAVHRVKVTFKDEPGEGSG 2290

  Fly  2642 PTLEFYALVSAELQRTDLGLWNGSDSYKQNSVTIVDVVKANSAVLHIEDALEATTTDQNTPAVAG 2706
            ....||..::                                         :|..:::..|.:..
  Rat  2291 VARSFYTAIA-----------------------------------------QAFLSNEKLPNLDC 2314

  Fly  2707 ASLVSSSTTTTTTTAQQHQHPPTRSSSRSHVLRSGAGQQPVEHSSSSAGANENALNMVIAQQFSD 2771
            ....:..|.|:.....:::....|...|...:|..:|.:        ||:..:.......|...|
  Rat  2315 IQNANKGTHTSLMQRLRNRGERDREREREREMRRSSGLR--------AGSRRDRDRDFRRQLSID 2371

  Fly  2772 TNSANPAAIDNPS-----------------------------STTTA------------------ 2789
            |....||:..|||                             |..|.                  
  Rat  2372 TRPFRPASEGNPSDDPDPLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASED 2436

  Fly  2790 ----------TTVVQHNTTTNNSSIITTTTTTS-------------------------------- 2812
                      ..:|.|.......||:......|                                
  Rat  2437 SLRARVEEAMELIVAHGRENGADSILDLGLLDSSEKVQENRKRHGSSRSVVDMDLDDTDDGDDNA 2501

  Fly  2813 ---YVHAVHGLF-PLPLGKSSKLPQMTKAKAK-FKFLGKFMAKAVMDSRMLDLPFSLPFYRWLVS 2872
               |.....|.: |.| ||:      |:|:.. |:.:|:.:...::.:.:..:..:....:.|:.
  Rat  2502 PLFYQPGKRGFYTPRP-GKN------TEARLNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLG 2559

  Fly  2873 EE---HSIGLADLMRVAPEVQNTLVRLQDLVRQREYILSDPNIDAMEKTEKIEQLDLDGCPIADL 2934
            .:   |.....|     |.:..:|         |:.||:..:.||             ....:.:
  Rat  2560 RKVNWHDFAFFD-----PVMYESL---------RQLILASQSSDA-------------DAVFSAM 2597

  Fly  2935 GLDFVL-----PGHANIELCRGGRDTPVTVHNLHQYISLVTYWFLIEGVQKQFEALREGFDSVFP 2994
            .|.|.:     .|...:||...|.:.|||..|:::|:.......::...::...|:|:|...|.|
  Rat  2598 DLAFAVDLCKEEGGGQVELIPNGVNIPVTPQNVYEYVRKYAEHRMLVVAEQPLHAMRKGLLDVLP 2662

  Fly  2995 IQRLRMFYPEELECVFCGSGSEQQHSRWEIKMLQE--SCRTDHGFHQDS--QAIQYLYEILASYN 3055
            ...|.....|:...:..|.|..      .::||..  |...:.|.:.:.  |..::.:.|:...:
  Rat  2663 KNSLEDLTAEDFRLLVNGCGEV------NVQMLISFTSFNDESGENAEKLLQFKRWFWSIVERMS 2721

  Fly  3056 RDEQRAFLQFVTGSPRLPTG--GFKALTPPLTIVRKTLDENQNPND-YLPSVMTCVNYLKLPDYS 3117
            ..|::..:.|.|.||.||..  ||:.: |.:||        :.|:| :||:..||::.|.:|.||
  Rat  2722 MTERQDLVYFWTSSPSLPASEEGFQPM-PSITI--------RPPDDQHLPTANTCISRLYVPLYS 2777

  Fly  3118 SREVMRQKLKVAANEGSMSF 3137
            |:::::|||.:|....:..|
  Rat  2778 SKQILKQKLLLAIKTKNFGF 2797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669 9/49 (18%)
WWE 1409..1481 CDD:128922 18/112 (16%)
FAM199X <1985..2074 CDD:292442 25/91 (27%)
HECTc <2818..3138 CDD:294058 73/337 (22%)
Ubr5XP_038936091.1 CUE_UBR5 184..230 CDD:270606 10/45 (22%)
ZnF_UBR1 1177..1244 CDD:197698 19/150 (13%)
PolyA 2389..2452 CDD:197769 3/62 (5%)
HECTc 2500..2795 CDD:214523 73/343 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.