Sequence 1: | NP_001189170.1 | Gene: | ctrip / 40596 | FlyBaseID: | FBgn0260794 | Length: | 3140 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038936091.1 | Gene: | Ubr5 / 117060 | RGDID: | 621236 | Length: | 2798 | Species: | Rattus norvegicus |
Alignment Length: | 3595 | Identity: | 605/3595 - (16%) |
---|---|---|---|
Similarity: | 1050/3595 - (29%) | Gaps: | 1331/3595 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 SVKSQSLSALTEGQHDDGGSTATSATLANKTSGTNTTSASNHSSQRRRNNNTNSNRNKSHHKNEK 68
Fly 69 RNAPATSGPAVSSSVDVVPATSTASATSTRRSRSQGRHSSAAALSSKESQIPK----RSVGAIRS 129
Fly 130 PSSPAFNSIP--VVSDQSLSPG-------SRK---RQLNQHNNS-----NNKASSSHQSAPGGDQ 177
Fly 178 LVCAPLKKRRLQQSLGSGICEGAVEINLGAASFDHTPRQASGDCVAQRTRSKTISP-EELPSTSS 241
Fly 242 AAAARHHQIRPSA---SSTSFSSSHRNKRKASIGGSIAAVETTPHRGTAAARAGRSGNLLNYYRK 303
Fly 304 TRKVSHTRSSQKSEKQSIPAEDTTANRNGSAGSGSSSKSGVIPKNRKS-LRHSQQNLLDTEAAEV 367
Fly 368 ESAAAETGGEQQSEHGNLDVIDQLPT---------PE--------AGPNQSEASGIHNQSQLEAD 415
Fly 416 RQPVVQDEDDEEDDEEEEEEEEEEVGFYGIVN------SAGSSYEEDTQIVAEEDEITTEEEVDD 474
Fly 475 EDDDEIEEEDLSESEFAQQLIGELGGER---------------------------QQPQRATNNA 512
Fly 513 KKTKNNTPAVAAASTIKATTTATTSSGYQQRAAPHGQGAAPGAGGGGPRATRSSNSNSSNNVVDY 577
Fly 578 SI--MPHLTTVATTTPHALTPQQHQQQRQPPQPPSHQQQQVHQQQQPPQLLPTHQFAHLSSFVTP 640
Fly 641 TAAAAAAAAAAHYPPASAAAAYFAQQQHHQHQHQHQQ----QHVQQAQAPQPHYYHSSVAVLHQP 701
Fly 702 PPHHFTS--TGAGP---PPALFQQQAPPQLTRY--TPATATTAATFVPPQQQQV---VYNPQQQQ 756
Fly 757 HSSLRRSSRG-----KTGS----CVSSAAAAQQQQHHQ----------QQQHSSAAAAVQQQL-- 800
Fly 801 ---------------------------LPP-----PGTYQYQQVGGNT--------VVVAVRHQQ 825
Fly 826 QLQQQQQQQQQLALHHQHQQQQHQQQQQQHQQQQ----HQQQQRATLVQPGFLFSY-RSNQPQQQ 885
Fly 886 QQPAQQIHQGPKVTHSSAASDALTYSLMAQQPPSGPPHAGGQQITPGANSANLSIVAAALSAARD 950
Fly 951 VGGGSDGGGSAGGA-----TPATGASASSVGNTSAVGASSSSNSSAGQ----------------- 993
Fly 994 --------AASSNSNNVTATGSGSAPGGGPTSTGTTSGTQHGSGSGAAAAVDSESD--------- 1041
Fly 1042 ---DSEVGR--LQALL---EARGLPPHLFGALG---PRVTHILHRTIGNSSSSKANQLLQGLQSH 1095
Fly 1096 DESQQLQAAIEMCQMLVMGNEDTLAGFPIKQVVPALIQLLRMEHNFDIMNNACRALAYMLEALPR 1160
Fly 1161 SSGTVVEAVPVFLEKLQVIQCMDVAEQSLSALEILSRRHNKAILQANGISACLTYLDFFSIVAQR 1225
Fly 1226 AALAIAANCCLNMHPEEFHFVAESLPLLARLLSQQDKKCIESVCSAFCRLVESFQHDGQ--RLQQ 1288
Fly 1289 IASPDLLKNCQQLLLVTPAILNTGTFTAVVRMLSLMCCSCPDLAISLLRNDIAATLLY-LLTGNA 1352
Fly 1353 EPAAASATHVELISRSPSELYELTCLIGELMPRLPLDGIFAVDSLLDRPTLNTQDQVHWQW---- 1413
Fly 1414 -RDDRG-------------------------------SWHNYSTIDSRLIEAANQSSEDEISLST 1446
Fly 1447 -FGRTYTVDFHAMQQ----INEDTGTTRPVQRRLNHNYVAPMSAGQDLTTTSAGSAAAGGASTSA 1506
Fly 1507 AAAAASSNNNNNNNNNPPGNSVNLNQVKRRPSLDARIACLKEERGLAADFIKHIFNVLYEVYSSS 1571
Fly 1572 AG-----PNVRYKCLRALLRMVYYATPELLRQVLKYQLVSSHIAGMLGSNDLRIVVGALQMAEIL 1631
Fly 1632 MRQLPDVFGTHFRREGVIYQFTQLTDPNNPICANPSPKPLSATATPTANAGGSQSAPASANSLQV 1696
Fly 1697 NPFFMDSAPGLSSASTTPSSSKHQSYSVKSFSHAMNALTASAKGTPSGALDATSSSTTAGGYNYS 1761
Fly 1762 SSAPSSSSGAPAAYFVTQQGDPRQ-YVHFQQPAVPAPPPQQELLPSGVQQ-------QGQQVPQV 1818
Fly 1819 IYQPHHQQPAHLVLASTSSGAASSSSSSSSSSSASALQHKMTDMLKRKAPPKRKSQSGGRAKSRQ 1883
Fly 1884 EDAAVAPAGSGPGGAPPSSSGSAMHELLSRATSLGSGNGGRSTPNSGGGSGSSKSRFNAGNSSNA 1948
Fly 1949 GSSKS------SFLASLNPARWGRQTHQNHHHHHQQSQQ------QHHGLSKDSGNSNSTGSGSG 2001
Fly 2002 AGLAYTVSQHGAGSGAGGLNAAAVAASISKSISHANLLAAANRERARQWVREQAVD---FVKRYT 2063
Fly 2064 EQEAKRSKAASESGATQSGSSGVGLSS--------TGNTPLSTAGSTNVLERLSSILFKLNGSYH 2120
Fly 2121 DCLDALLELKTILLESDISPFEVNHSGLIKAMLNYMTS--ETGLVERDARLRSFMHVFAGLPLEP 2183
Fly 2184 LLQNVGQMPTIEPIAFGAFVAKLNGCVTQLEQFPVKVHDFPAGPGGRSNQSALRFFNTHQLK--- 2245
Fly 2246 -------CNLQRHPQC-NNLRQW---KGGTVKIDPLAMVQAIERYLVVRGYGGIRADSDDDSEED 2299
Fly 2300 MDDNVAAVVLSQAS--------------FRHKLQFTIGDHV--LPYNMTVYQAVKQFSPLVSEQP 2348
Fly 2349 ---ETDNESETLLGNASIWVQQHTIHYRPVEEEVTSGAAAG----AASSSSSCSSGVQKQQSSSS 2406
Fly 2407 SASSCVNATSSCSSSSGVASGGGSLTKKAHKSSSKFMRKKTELWHEGIAPVVISALKPFLSSSLP 2471
Fly 2472 ADVVTVQDASLDALCMLRVIHALNRHWDHLYGCVVRQNIIPQSDFI-----HPKIMAKANRQLQ- 2530
Fly 2531 -----------DPLVIMTGNLPQWLPQIGMACPFLFPFETRHLLFYATSFDRDRALQRLLDTTPD 2584
Fly 2585 LNAAESSERVAPRLDRRKRAISRTEILKQAEHILQD-FGHSKAL-------LEIQYENEVGTGLG 2641
Fly 2642 PTLEFYALVSAELQRTDLGLWNGSDSYKQNSVTIVDVVKANSAVLHIEDALEATTTDQNTPAVAG 2706
Fly 2707 ASLVSSSTTTTTTTAQQHQHPPTRSSSRSHVLRSGAGQQPVEHSSSSAGANENALNMVIAQQFSD 2771
Fly 2772 TNSANPAAIDNPS-----------------------------STTTA------------------ 2789
Fly 2790 ----------TTVVQHNTTTNNSSIITTTTTTS-------------------------------- 2812
Fly 2813 ---YVHAVHGLF-PLPLGKSSKLPQMTKAKAK-FKFLGKFMAKAVMDSRMLDLPFSLPFYRWLVS 2872
Fly 2873 EE---HSIGLADLMRVAPEVQNTLVRLQDLVRQREYILSDPNIDAMEKTEKIEQLDLDGCPIADL 2934
Fly 2935 GLDFVL-----PGHANIELCRGGRDTPVTVHNLHQYISLVTYWFLIEGVQKQFEALREGFDSVFP 2994
Fly 2995 IQRLRMFYPEELECVFCGSGSEQQHSRWEIKMLQE--SCRTDHGFHQDS--QAIQYLYEILASYN 3055
Fly 3056 RDEQRAFLQFVTGSPRLPTG--GFKALTPPLTIVRKTLDENQNPND-YLPSVMTCVNYLKLPDYS 3117
Fly 3118 SREVMRQKLKVAANEGSMSF 3137 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ctrip | NP_001189170.1 | Extensin_2 | <688..731 | CDD:252669 | 9/49 (18%) |
WWE | 1409..1481 | CDD:128922 | 18/112 (16%) | ||
FAM199X | <1985..2074 | CDD:292442 | 25/91 (27%) | ||
HECTc | <2818..3138 | CDD:294058 | 73/337 (22%) | ||
Ubr5 | XP_038936091.1 | CUE_UBR5 | 184..230 | CDD:270606 | 10/45 (22%) |
ZnF_UBR1 | 1177..1244 | CDD:197698 | 19/150 (13%) | ||
PolyA | 2389..2452 | CDD:197769 | 3/62 (5%) | ||
HECTc | 2500..2795 | CDD:214523 | 73/343 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |