DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ctrip and hectd1

DIOPT Version :9

Sequence 1:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:XP_012823549.1 Gene:hectd1 / 100192372 XenbaseID:XB-GENE-1010869 Length:2580 Species:Xenopus tropicalis


Alignment Length:2890 Identity:563/2890 - (19%)
Similarity:871/2890 - (30%) Gaps:1160/2890 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  1089 LQGLQSHDESQQLQAAIEMCQMLVMGN--EDTLAGFPIKQVVPALIQLLRMEHNFD-IMNNACRA 1150
            ||..|..:...||.|..::|.:|:|.:  :......|.:..:|||.::...|...| ::....||
 Frog    13 LQMGQGDERDMQLIALEQLCMLLLMSDNVDRCFETCPPRTFLPALCKIFLDESAPDNVLEVTARA 77

  Fly  1151 LAYMLEALPRSSGTVV---EAVPVFLEKLQVIQ-----CMDVAEQSLSALEILSRRHNKAILQAN 1207
            :.|.|:.....:..:|   .|:.....:|.|::     ..|:|||.:..||::..|.:.|:.:|.
 Frog    78 ITYYLDVSAECTRRIVGVEGAIKALCNRLVVVELNNRTSRDLAEQCVKVLELICTRESGAVFEAG 142

  Fly  1208 GISACLTYL-DFFSIVAQ---RAALAIAANCCLNMHPEE--FHFVAESLPLLARLLSQQDKKCIE 1266
            |::..||:: |...:|.:   .:|:|:.:..|..|.|::  .....||   |:.||..:|.:..:
 Frog   143 GLNCVLTFIRDSGHLVHKDTLHSAMAVVSRLCGKMEPQDASLETCVES---LSSLLKHEDHQVSD 204

  Fly  1267 SVCSAFCRLVESFQHDGQRLQQIASPDLLKNCQQLLLVTPAILN-------TGTFTA-------- 1316
            .....|..|.:.|...|.....:|...|.:.....:......::       ||..|:        
 Frog   205 GALRCFASLADRFTRRGVDPAPLAQHGLTEELLSRMAAAGGTVSGPSSACKTGRGTSGGPSTSGD 269

  Fly  1317 ---------VVRMLSLMCCSCPDLAISLLRNDIAATLLYLLTGN--------------------- 1351
                     :|.:||.:|...|.:...|||.::..::...|.|:                     
 Frog   270 SKISNQVSTIVSLLSTLCRGSPVVTHDLLRAELLDSMESALQGDERCVLDTMRLVDLLLVLLFEG 334

  Fly  1352 ----AEPAAASATHVELISRSPSELYELTCLIGELMPRLPLDGIFA--VDSLLD----------- 1399
                .:.:|.|...:..:.|..|.        ||...|..:|.|.:  .|:|:|           
 Frog   335 RKALPKSSAGSTGRIPGLRRLDSS--------GERSHRQLIDCIRSKDTDALIDAIDTGAFEVNF 391

  Fly  1400 -----RPTLN------TQDQVHWQW-------RDDRGSWHNYSTIDSR-------LIEAANQSSE 1439
                 :..||      ||:.|.:..       |..|.|..:|:....|       |...||....
 Frog   392 MDDVGQTLLNWASAFGTQEMVEFLCERGADVNRGQRSSSLHYAACFGRPQVAKTLLRHGANPDLR 456

  Fly  1440 DEISLSTF------GRTYTVDF-----------------------HAMQQINEDTG--------- 1466
            ||...:..      |.:..|..                       ...::.||..|         
 Frog   457 DEDGKTPLDKARERGHSEVVAILQSPGDWMCPVNKGDEKKKKDSNREEEECNEPKGDPEMAPIYL 521

  Fly  1467 -------------TTRPVQRRLNHNYVAPM---------------SAGQDLTTTSAGSAAA---- 1499
                         |..|..|:.:...:..|               .||.:|.|......|.    
 Frog   522 KRLLPVFAQTFQQTMLPSIRKASLALIRKMIHFCSEALLKEVCHSDAGHNLPTVLVEITATVLDQ 586

  Fly  1500 --------------------------------GGASTSAAAAAASSNNNNNNNNNP--------- 1523
                                            |..|..:..|..:|::.|..::.|         
 Frog   587 EDDDDGHLLALQIIRDLVDKGDDLFLDQLARLGVISKVSTLAGPTSDDENEEDSKPEKVRIHLFP 651

  Fly  1524 -----PGNSVNLNQVKR-RPSLDAR---------------------------IACLKEERGLAAD 1555
                 .|.....:|:|. .|..||:                           .|.|:...|....
 Frog   652 LYSAHKGTQAAASQLKEDEPQEDAKELQQGRPYHWRDWSVIRGRDCLYIWSDAAALELSNGSNGW 716

  Fly  1556 FIKHIFNVLYEVYSS------SAGPNVRYKCLRALLRMVYYATPELLRQVLKYQLVSSHIAGMLG 1614
            |...:...|..:|||      |.....|.:.|..|.|         .|..:|....|..|....|
 Frog   717 FRFILDGKLATMYSSGSPEGGSDSSESRSEFLEKLQR---------ARSQVKPSTSSQPILSTPG 772

  Fly  1615 SNDLRIVVGAL---------------QMAEILMRQLP---------------------------- 1636
            ...|.:...:|               |.|.||...||                            
 Frog   773 PGKLTVGNWSLTCLKDGEIAIHNSDGQQATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGW 837

  Fly  1637 ------------------------DVFGTHFRR-----EGVIYQF----TQLTDP---------- 1658
                                    |::..||:.     .||:...    |||...          
 Frog   838 TGKRGRKLKSKLEKTKQKVRTMARDLYDDHFKAVESMPRGVVVTLRNIATQLESAWELHTNRQCI 902

  Fly  1659 ----------------------------------------------NNPIC-----ANPSPKPLS 1672
                                                          ||..|     .....:.|:
 Frog   903 EGENTWRDLMKTALENLIVLLKDENTISPYEMCSSGLVQALLTVLNNNEDCDIKQDCGQLVERLN 967

  Fly  1673 ATATPTANAGGSQSAPA--------------------------SANSLQVNP----FFMDSAPGL 1707
            ...|..:.....:|.||                          |:.:||:..    |.::.|||.
 Frog   968 VFKTAFSENEDDESRPAVALVRKLIAVLESIERLPLHLYDTPGSSYNLQILTRRLRFRLERAPGE 1032

  Fly  1708 SS-------------ASTTPSSSKH-------QSYSVKS----------------FSH------- 1729
            :|             .:|..|..::       |.|....                |.|       
 Frog  1033 TSLIDRTGRMLKMEPLATVESLEQYLLKMVAKQWYDFDRSSFVFVRKLREGQSCVFRHQHDFDDN 1097

  Fly  1730 ------AMNALTASAKGTPS--GALDATSSSTTAGGYNYSSSAPSSSSGA--------------- 1771
                  ..||.||.....|:  |.:..|||......|.......|..|.|               
 Frog  1098 GIMYWIGTNAKTAYEWVNPAAYGLVVVTSSEGRNLPYGRLEDILSRDSSALNCHTNDDKSAWFAI 1162

  Fly  1772 -------PAAY---------------FVTQQGDPRQ-----YVHFQQ------------PAVPAP 1797
                   |:||               :|.|.....|     |.|...            |..||.
 Frog  1163 DLGLWVVPSAYTLRHARGYGRSALRNWVFQVSKDGQNWTTLYTHMDDCSLNEPGSTATWPLDPAR 1227

  Fly  1798 PPQQELLPSGVQQQGQQVPQVIYQPHHQQPAHLVLASTSSGAASSSSSSSSSSSASALQHK---- 1858
            ..:|......::|.|:....   |.|:...:...|....:|........::..:.:.|:.:    
 Frog  1228 EEKQGWRHVRIKQTGKNASG---QTHYLSLSGFELYGNVTGVCEDQLGKAAKEAEANLRRQRRLV 1289

  Fly  1859 MTDMLKRKAPPKR---------KSQSGGR------------------------------------ 1878
            .:.:||...|..|         :.|.|..                                    
 Frog  1290 RSQVLKYMVPGARVIRGIDWKWRDQDGSAQGEGTVTGELHNGWIDVIWDAGGSNSYRMGAEGKFD 1354

  Fly  1879 ---AKSRQEDAAVAP-------AGSGPG-----------GAPPSSSGSAMHELLSRATSLGSGNG 1922
               |.....::||:|       ||:.|.           .||||||.|.:               
 Frog  1355 LKLAPGYDPESAVSPKPVSSTVAGTPPSWSSLVKNNCPDKAPPSSSSSCV--------------- 1404

  Fly  1923 GRSTPNSGGGSGSSKSRFNAGNSSNAGSSKSSFLASLNPARWGRQTHQNHHHHHQQSQQQHHG-- 1985
               ...|..||||.|     |:||:..|..||...||:.|:..|:.       .:|....||.  
 Frog  1405 ---VVGSVAGSGSRK-----GSSSSVCSVASSSDVSLSCAKTERRA-------EEQVSDIHHDPI 1454

  Fly  1986 --LSKDSGNSNSTGSGSGAGLAYTVSQHGAGSGAGGLNAAAVAASISK---SISHANLLAA---A 2042
              ||     ||...|||.     |....|...|.||...|..|.:||.   |||..::.:.   :
 Frog  1455 LLLS-----SNQAASGSS-----TCPPGGETVGEGGDRKAGEAPAISMGMVSISSPDVSSVSELS 1509

  Fly  2043 NRERARQWVREQAVDFVKRYTEQEAKRSKAASE---SGATQSGSSGV-GLSS------------- 2090
            |:|.|           |.|.....|....:.|.   :||..|.|:.| .|||             
 Frog  1510 NKEVA-----------VPRPLGSSASNRLSVSSLLAAGAPMSSSASVPNLSSRETSSLESFVRRV 1563

  Fly  2091 --------TGNTPLSTAGS---TNVLER--LSSILFKLNGSYHDCLDALLELKTILLESDISPFE 2142
                    |.|..||.:.|   ||.|.|  :||....|.|:     .:...|.|....|.::   
 Frog  1564 ANIARTNATNNMNLSRSSSDNNTNTLGRNAVSSATSPLMGA-----QSFPNLTTTGTTSTVT--- 1620

  Fly  2143 VNHSGLIKAMLNYMTSETGLVERDARLRSFMHVFAGLPLEPLLQNVGQMPTIEPIAFGAFVAKLN 2207
            ::.|.:..:  |..|:.|||                        :|||             :..|
 Frog  1621 MSTSSVTSS--NVATATTGL------------------------SVGQ-------------SLSN 1646

  Fly  2208 GCVTQLEQFPVKVHDFPAGPGGRSNQSALRFFNTHQLKCNLQRHPQCNNLRQWKGGTVKIDPLAM 2272
            ...|.|.....:     :..|..:..|...|.::.:....|.......:|               
 Frog  1647 TLTTSLTSTSSE-----SDTGQEAEYSLYDFLDSCRASTLLAELDDDEDL--------------- 1691

  Fly  2273 VQAIERYLVVRGYGGIRADSDDDSEEDMDDNVAAVVLSQASFRHKLQFTIG-------DHVLPYN 2330
                             .:.|::.:|:.|||.......:.....:.:...|       |:||.  
 Frog  1692 -----------------PEPDEEDDENEDDNQEEQEYEEVMEEEEYETKGGRRRTWDDDYVLK-- 1737

  Fly  2331 MTVYQAVKQFSPLV----------SEQPETDNE--------SETL-------------------L 2358
                   :|||.||          :.|..||.|        ||.|                   |
 Frog  1738 -------RQFSALVPAFDPRPGRTNVQQTTDLEIPAPGTPHSELLEEVECAPAPRLALTLKVTGL 1795

  Fly  2359 GNA------------------------------------SIWVQQHTIHYRPVEEEVTSGAAAGA 2387
            |:.                                    .||...:||.||.:::     :....
 Frog  1796 GSGREVELPLNNFRSTIFFYVQRLLQLSCNGAIKTDKLRRIWEPTYTIMYREMKD-----SDKQK 1855

  Fly  2388 ASSSSSCSSGVQKQQSSSSSASSCVNATSSCSSSSGVASGGGSLTKKAHKSSSKFMRKKTELWHE 2452
            ......|.|....:||..:.|....:..:....:    :..|.|.:.....::|.:||...    
 Frog  1856 ECGRLGCWSVEHVEQSLGTDALPKNDLITYLQRN----ADPGFLRRWKLTGTNKSIRKNRN---- 1912

  Fly  2453 GIAPVVISALKPFL-----SSSLPADVVTVQDASL----------------------DALCMLRV 2490
              ...:|:|.|.|.     |.|:||.:.|:|.|.:                      |.|.:||:
 Frog  1913 --CSQLIAAYKDFCENGCKSLSMPAALATLQSADILSHSREQAQAKAGSSQNSCGVEDVLQLLRI 1975

  Fly  2491 IHALNRHWDHLYGCVVRQN--------IIPQSDFIHPKIMAKANRQLQDPLVIMTGNLPQWLPQI 2547
            :..:.   ...|.....|.        .:|..:|...||..|..:|:::||.:.:|.||.|..|:
 Frog  1976 LFIVA---SDPYSARTPQEDGEDMLLFSVPPEEFTSKKITTKIVQQIEEPLALASGALPDWCEQL 2037

  Fly  2548 GMACPFLFPFETRHLLFYATSFDRDRA---LQRLLDTTPDLNAAESSER-------VAPRLDRRK 2602
            ...||||.|||||.|.|..|:|...||   ||...:.|.:.:...|:.|       ...||...:
 Frog  2038 TSKCPFLIPFETRQLYFTCTAFGASRAIVWLQNRREATVERSRTASAVRRDDPGEFRVGRLKHER 2102

  Fly  2603 RAISRTE-ILKQAEHILQDFGHSKALLEIQYENEVGTGLGPTLEFYALVSAELQRTDLGLWNGSD 2666
            ..:.|.| :::.||:::|.....|::||:::..|.||||||||||||||:||.|:||||:|...|
 Frog  2103 VKVPRGESLMEWAENVMQIHADRKSVLEVEFLGEEGTGLGPTLEFYALVAAEFQKTDLGIWLCDD 2167

  Fly  2667 SYKQNSVTIVDVVKANSAVLHIEDALEATTTDQNTPAVAGASLVSSSTTTTTTTAQQHQHPPTRS 2731
            .:..:....||:                                                     
 Frog  2168 DFPDDESRQVDL----------------------------------------------------- 2179

  Fly  2732 SSRSHVLRSGAGQQPVEHSSSSAGANENALNMVIAQQFSDTNSANPAAIDNPSSTTTATTVVQHN 2796
                     |.|.:|..:                                               
 Frog  2180 ---------GGGLKPPGY----------------------------------------------- 2188

  Fly  2797 TTTNNSSIITTTTTTSYVHAVHGLFPLPLGKSSKLPQMTKAKAKFKFLGKFMAKAVMDSRMLDLP 2861
                            ||....|||..|..:.|:  ::.:......|||.|:||.:.|:|::|||
 Frog  2189 ----------------YVQRSCGLFIAPYPQDSE--ELDRVTRLCHFLGVFLAKCIQDNRLVDLP 2235

  Fly  2862 FSLPFYRWLV------------------SEEH-----------------SIG------------- 2878
            .|.||::.:.                  ..||                 |:|             
 Frog  2236 ISKPFFKLMCMGDIKSNMSKLLYASRGEESEHCTESQSEASTEDGHDALSVGSFEEDCKSEFILD 2300

  Fly  2879 ---------------LADLMRVAPEVQNTLVRLQDLVRQREYILSDPNIDAMEKTEKIEQLDL-- 2926
                           ..|...:.|.....|..:::|..:|..||.:..:...||..::::|.|  
 Frog  2301 PPKPKPPAWFQGILTWEDFELINPHRARFLRDIRELAVKRRQILGNRCLSEDEKNTQLQELMLKN 2365

  Fly  2927 ---DGCPIA--DLGLDFV------LPGHANIELCRGGRDTPVTVHNLHQYISLVTYWFLIEGVQK 2980
               .|.|::  ||||:|.      :.|.:.::|...|.|..||:.|..:|:.|:..:.:..||||
 Frog  2366 PSGSGPPVSIEDLGLNFQFCPSSRVYGFSAVDLRPNGEDEMVTIDNAEEYVDLMFDFCMQTGVQK 2430

  Fly  2981 QFEALREGFDSVFPIQRLRMFYPEELECVFCGSGSEQQHSRWEIKMLQESCRTDHGFHQDSQAIQ 3045
            |.||.|.||:.|||:::|..|.|||::.:.||:    |...|..:.:........|:.::|....
 Frog  2431 QMEAFRSGFNKVFPMEKLGSFSPEEVQMILCGN----QSPSWSAEDIINYTEPKLGYTRESPGFL 2491

  Fly  3046 YLYEILASYNRDEQRAFLQFVTGSPRLPTGGFKALTPPLTIVRKTLDENQNPNDYLPSVMTCVNY 3110
            ....:|...:.||::|||||.||...||.||...|.|.||:|||.   :.....| |||.|||:|
 Frog  2492 RFVRVLCGMSSDERKAFLQFTTGCSTLPPGGLANLHPRLTVVRKV---DATDASY-PSVNTCVHY 2552

  Fly  3111 LKLPDYSSREVMRQKLKVAANEGSMSFHLS 3140
            ||||:|||.|:||.:|..|..|  ..|||:
 Frog  2553 LKLPEYSSEEIMRDRLLAATME--KGFHLN 2580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669
WWE 1409..1481 CDD:128922 19/136 (14%)
FAM199X <1985..2074 CDD:292442 25/98 (26%)
HECTc <2818..3138 CDD:294058 116/395 (29%)
hectd1XP_012823549.1 Ank_2 366..457 CDD:372319 18/90 (20%)
ANK repeat 366..393 CDD:293786 5/26 (19%)
PLN03192 <386..612 CDD:215625 29/225 (13%)
ANK repeat 396..426 CDD:293786 6/29 (21%)
ANK repeat 428..457 CDD:293786 6/28 (21%)
F5_F8_type_C 1130..1263 CDD:390053 21/135 (16%)
MIB_HERC2 1300..1358 CDD:369043 3/57 (5%)
BTHB 1861..1927 CDD:375836 14/75 (19%)
HECTc 2101..2578 CDD:238033 155/613 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D10145at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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