DRSC/TRiP Functional Genomics Resources

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Protein Alignment ctrip and trip12

DIOPT Version :9

Sequence 1:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:NP_001136384.1 Gene:trip12 / 100158539 XenbaseID:XB-GENE-6071044 Length:2056 Species:Xenopus tropicalis


Alignment Length:2756 Identity:1034/2756 - (37%)
Similarity:1391/2756 - (50%) Gaps:780/2756 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   447 NSAGSSYEEDTQIVAEEDEITTEEEVDDEDDDEIEEEDLSESEFAQQLIGELGGERQQPQRATN- 510
            |:||:..:|||                                         .|.|...::|.| 
 Frog    19 NTAGAQPQEDT-----------------------------------------AGGRSNLEQAENK 42

  Fly   511 -----NAKKTKNNTPAVAAASTIKATTTATTSSGYQQRAAPHGQGAAPGAGGGGPRATRSSNSNS 570
                 .::|:...||.|      ::.||:..|.|:..:.........|     .|..|...|:..
 Frog    43 THSLPESRKSHFKTPKV------QSNTTSGPSKGHSSKRGCSSSNLLP-----NPEDTERINTTD 96

  Fly   571 SNNV-------VDYSIMP-HLTTVATTT---PHALTPQQHQQQRQPPQPPSHQQQQVHQQQQPPQ 624
            :...       |..|..| |..|.:.::   |.||   ||.:....|:.|:::.::....|:.| 
 Frog    97 TQRPKKDHVRGVKRSASPDHSRTNSPSSAKKPKAL---QHPEPSSGPRRPNNKPKKRQGSQEQP- 157

  Fly   625 LLPTHQFAHLSSFVTPTAAAAAAAAAAHYPPASAAAAYFAQQQHHQHQHQHQQQHVQQAQAP--- 686
                                        :|.||..:...|          |.::...|..:|   
 Frog   158 ----------------------------FPSASLPSTSKA----------HSRKGGSQGTSPLPK 184

  Fly   687 ------QPHYYHSSVAVLHQPPPHHFTSTGAGPPPALFQQQAPPQLTRYTPATATTAATFVPPQQ 745
                  .|....||.||:         ||||        :..||:|::....:||:|        
 Frog   185 RKRTELSPCVKSSSAAVI---------STGA--------EDRPPKLSKLASKSATSA-------- 224

  Fly   746 QQVVYNPQQQQHSSLRRSSRGKTGSCVSSAAAAQQQQHHQQQQHSSAAAAVQQQLLPPPGTYQYQ 810
                    :...|::..||...:.|..|||.|             |.:||       |||     
 Frog   225 --------KAGCSNITDSSSSASTSSSSSAVA-------------SVSAA-------PPG----- 256

  Fly   811 QVGGNTVVVAVRHQQQLQQQQQQQQQLALHHQHQQQQHQQQQQQHQQQQH-----QQQQRATLVQ 870
                      .|.:|...|.:.::.:.|.....::...:::|.:......     :...:.:|  
 Frog   257 ----------ARVKQGKDQNKARRSRSASSPSPRRSSREKEQTKTSSSSKFDWAARFSPKVSL-- 309

  Fly   871 PGFLFSYRSNQPQQQQQPAQQIHQGPKVTHSSAASDALTYSLMAQQPPSGPP--HAGGQQITPGA 933
            |....|...:...:..:|      ||....:..|:...:....::.||:..|  ....:|.|.| 
 Frog   310 PKTKLSLPGSSKTETSKP------GPSGLQAKLANLRKSTKKRSESPPAELPSLRRSTRQKTTG- 367

  Fly   934 NSANLSIVAAALSAARDVGGGSDGGGSAGGATPATGASASSVGNTSAVGASSSSNSSAGQAASSN 998
                        |.|.....|| |.|....|........:...|.....:|::......|.|:::
 Frog   368 ------------SCASTSRRGS-GLGKRAAAEARRQEKMADPDNQEGANSSAARTDETAQGAAAS 419

  Fly   999 SNNVTATGSGSAPGGGPTSTGTTSGTQHGSGSGAAAAVDSESDDSEVGRLQALLEARGLPPHLFG 1063
            |:...|.|.            ||||             :|||||||:||||||||||||||||||
 Frog   420 SSVAGAVGM------------TTSG-------------ESESDDSEMGRLQALLEARGLPPHLFG 459

  Fly  1064 ALGPRVTHILHRTIGNSSSSKANQLLQGLQSHDESQQLQAAIEMCQMLVMGNEDTLAGFPIKQVV 1128
            .||||::.:.|||||:.:||||.|||||||:.||||||||.|||||:||||||:||.|||:|.||
 Frog   460 PLGPRMSQLFHRTIGSGASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVV 524

  Fly  1129 PALIQLLRMEHNFDIMNNACRALAYMLEALPRSSGTVVEAVPVFLEKLQVIQCMDVAEQSLSALE 1193
            ||||.||:|||||||||:|||||.||:|||||||..||:|:||||||||||||:|||||:|:|||
 Frog   525 PALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALE 589

  Fly  1194 ILSRRHNKAILQANGISACLTYLDFFSIVAQRAALAIAANCCLNMHPEEFHFVAESLPLLARLLS 1258
            :|||||:||||||.|::.||.||:||||.|||.|||||||||.::.|:||||||:|||||.:.|:
 Frog   590 MLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSISPDEFHFVADSLPLLTQRLT 654

  Fly  1259 QQDKKCIESVCSAFCRLVESFQHDGQRLQQIASPDLLKNCQQLLLVTPAILNTGTFTAVVRMLSL 1323
            .||||.:||.|..|.|||::|||:...|||:||.|||.|.||||:|||.||::|.|..||||.||
 Frog   655 HQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPILSSGMFIMVVRMFSL 719

  Fly  1324 MCCSCPDLAISLLRNDIAATLLYLLTGNAEPAAASATHVELISRSPSELYELTCLIGELMPRLPL 1388
            ||.:||.||:.|::.:||.||.:||.|.:.  .:....::|:.|||.||||||.||.||||.||.
 Frog   720 MCSNCPTLAVQLMKQNIAETLHFLLCGASN--GSCLEQIDLVPRSPQELYELTSLICELMPCLPK 782

  Fly  1389 DGIFAVDSLLDRPTLNTQDQVHWQWRDDRGSWHNYSTIDSRLIEAANQSSEDEISLSTFGRTYTV 1453
            :||||||::|.:......|...||||||||.||.||.||||:||||:|..||||||||.||.||:
 Frog   783 EGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYSRIDSRIIEAAHQVGEDEISLSTLGRVYTI 847

  Fly  1454 DFHAMQQINEDTGTTRPVQRRLNHNYVAPMSAGQDLTTTSAGSAAAGGASTSAAAAAASSNNNNN 1518
            ||::||||||||||.|.:||:.|     |::                                  
 Frog   848 DFNSMQQINEDTGTARAIQRKPN-----PVA---------------------------------- 873

  Fly  1519 NNNNPPGNSVNLNQVKRRPSLDARIACLKEERGLAADFIKHIFNVLYEVYSSSAGPNVRYKCLRA 1583
             |.|..|:|    ::||.   |||...:||:..||..|||.:|.||||||||||||.||:|||||
 Frog   874 -NANTTGHS----ELKRD---DARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRA 930

  Fly  1584 LLRMVYYATPELLRQVLKYQLVSSHIAGMLGSNDLRIVVGALQMAEILMRQLPDVFGTHFRREGV 1648
            :||::|:|..|||:.|||...||||||.||.|.||:|||||||||||||::|||:|..:||||||
 Frog   931 ILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGV 995

  Fly  1649 IYQFTQLTDPNNPICANPSPKPLSATATPTANAGGSQSAPASANSLQVNPFFMDSAPGLSSASTT 1713
            ::|                                                              
 Frog   996 MHQ-------------------------------------------------------------- 998

  Fly  1714 PSSSKHQSYSVKSFSHAMNALTASAKGTPSGALDATSSSTTAGGYNYSSSAPSSSSGAPAAYFVT 1778
                      ||:.:.:...||:..|...:|:....|::|                         
 Frog   999 ----------VKNLAESEALLTSPPKVCTNGSGSLASTTT------------------------- 1028

  Fly  1779 QQGDPRQYVHFQQPAVPAPPPQQELLPSGVQQQGQQVPQVIYQPHHQQPAHLVLASTSSGAASSS 1843
                                                                  .||.||.||.:
 Frog  1029 ------------------------------------------------------ISTGSGTASGN 1039

  Fly  1844 SSSSSSSSASALQH-----------KMTDMLKRKAPPKRKSQSGGRAKSRQEDAAVAPAGSGPGG 1897
            |::...|  .:|||           :::|:||||..|||    |.|.               |..
 Frog  1040 SAADLGS--PSLQHRDDSLDLSPPGRLSDVLKRKRLPKR----GPRR---------------PKY 1083

  Fly  1898 APPSSSGSAMHELLSRATSLGSGNGGRSTPNSGGGSGSSKSRFNAGNSSNAGSSKSSFLASLNPA 1962
            :||.......::..|..|:                                 .|..||||||||.
 Frog  1084 SPPRDEDKVDNQAKSPTTT---------------------------------QSPKSFLASLNPK 1115

  Fly  1963 RWGRQTHQNHHHHHQQSQQQHHGLSKDSGNSNSTGSGSGAGLAYTVSQHGAGSGAGGLNAAAVAA 2027
            .|||.:.|:                    |||:......||::             ||..||...
 Frog  1116 TWGRLSTQS--------------------NSNNIEPARTAGVS-------------GLARAASKD 1147

  Fly  2028 SISKSISHANLLAAANRERARQWVREQAVDFVKRYTEQEAKRSKAASESGATQSGSSGVGLSSTG 2092
            :||.           ||||.|.|::|||..||:||...|                      :..|
 Frog  1148 TISN-----------NRERIRGWIKEQAHKFVERYFSSE----------------------NMDG 1179

  Fly  2093 NTPLSTAGSTNVLERLSSILFKLNGSYHDCLDALLELKTILLESDISPFEVNHSGLIKAMLNYMT 2157
            :.|     :.|||:||.:...:||......::.|:|:::|:.|||:|.||:.|||.:|.:|.|:|
 Frog  1180 SNP-----ALNVLQRLCNATEQLNLQVDGGVECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLT 1239

  Fly  2158 SET--GLVERDARLRSFMHVFAGLPL---EPLLQNVGQMPTIEPIAFGAFVAKLNGCVTQLEQFP 2217
            |::  .:|.||.||:.|:|||.|.||   |||    .::...|.....|.|.|:|.|::|:||||
 Frog  1240 SKSDKDIVSRDIRLKRFLHVFFGTPLPGEEPL----AKLDPTENRHLLALVHKMNNCLSQMEQFP 1300

  Fly  2218 VKVHDFPAGPG-GRSNQSALRFFNTHQLKCNLQRHPQCNNLRQWKGGTVKIDPLAMVQAIERYLV 2281
            |||||||:|.| |.....||:|||||||||.|||||.|.|::|||||.|||||||:|||||||||
 Frog  1301 VKVHDFPSGNGTGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLV 1365

  Fly  2282 VRGYGGIR---ADSDDD-SEEDMDDNVAAVVLSQASFRHKLQFTIGDHVLPYNMTVYQAVKQFSP 2342
            |||||.:|   .||||| |:|::|:::||..|:..:.||:|||.||||:|||||||||||:|:|.
 Frog  1366 VRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQYSI 1430

  Fly  2343 LVSEQPETDNESETLLGNASIWVQQHTIHYRPVEEEV-----TSGAAAGAASSSSSCSSGVQKQQ 2402
            ...|:.|:.::....||.|.||.:.|||.|:||.||.     |.|...|.|.::.:         
 Frog  1431 QTEEERESTDDESNPLGRAGIWTKTHTIWYKPVREEEESAKDTVGGKRGRAQTAPT--------- 1486

  Fly  2403 SSSSSASSCVNATSSCSSSSGVASGGGSLTKKAHKSSSKFMRKKTELWH--EGIAPVVISALKPF 2465
                                              |:|.:..:|..||||  :|:.|.:::.|:.:
 Frog  1487 ----------------------------------KTSPRNSKKHDELWHGKDGVCPRILNPLEVY 1517

  Fly  2466 LSSSLPADVVTVQDASLDALCMLRVIHALNRHWDHLYGCVVRQNIIPQSDFIHPKIMAKANRQLQ 2530
            |.|. |.:.:|..|.|||.:.:|||:||::|:|.:||...|.:.|||.|:|.:.|:.||||||||
 Frog  1518 LISG-PPENITFDDPSLDVVILLRVLHAISRYWYYLYDNAVCKEIIPTSEFNNSKLTAKANRQLQ 1581

  Fly  2531 DPLVIMTGNLPQWLPQIGMACPFLFPFETRHLLFYATSFDRDRALQRLLDTTPDLNAAESSE-RV 2594
            |||||||||:|.||.::|.:|||.|||:||.:|||.|:||||||:||||||.|::|.::|.: ||
 Frog  1582 DPLVIMTGNIPTWLTELGKSCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRV 1646

  Fly  2595 APRLDRRKRAISRTEILKQAEHILQDFGHSKALLEIQYENEVGTGLGPTLEFYALVSAELQRTDL 2659
            ||||||:||.::|.::|||||.::||.|.|:|:||||||||||||||||||||||||.||||.||
 Frog  1647 APRLDRKKRTVNREDLLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADL 1711

  Fly  2660 GLWNGSDSYKQNSVTIVDVVKANSAVLHIEDALEATTTDQNTPAVAGASLVSSSTTTTTTTAQQH 2724
            |||.|.:                                                          
 Frog  1712 GLWRGEE---------------------------------------------------------- 1718

  Fly  2725 QHPPTRSSSRSHVLRSGAGQQPVEHSSSSAGANENALNMVIAQQFSDTNSANPAAIDNPSSTTTA 2789
                                                                 ..:.||..:...
 Frog  1719 -----------------------------------------------------VTLPNPKGSQEG 1730

  Fly  2790 TTVVQHNTTTNNSSIITTTTTTSYVHAVHGLFPLPLGKSSKLPQMTKAKAKFKFLGKFMAKAVMD 2854
                                 |.|:|.:.|||.||.|:::|...:.|.|.||:||||.||||:||
 Frog  1731 ---------------------TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMD 1774

  Fly  2855 SRMLDLPFSLPFYRWLVSEEHSIGLADLMRVAPEVQNTLVRLQDLVRQREYILSDPNIDAMEKTE 2919
            .|::|:|..||||:|::.:|.|:...||:.:.|.|..::..|:|:|||::.:..|..........
 Frog  1775 FRLVDIPLGLPFYKWMLRQESSLATHDLVNIDPVVAKSVYHLEDIVRQKKRLEQDKAQTKESLQF 1839

  Fly  2920 KIEQLDLDGCPIADLGLDFVLPGHANIELCRGGRDTPVTVHNLHQYISLVTYWFLIEGVQKQFEA 2984
            .:|.|:::||.:.||||||.|||..||||.:||:|.|||:|||..|:.||.||.|.|||.:|.::
 Frog  1840 ALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIHNLEDYVRLVIYWALNEGVSRQLDS 1904

  Fly  2985 LREGFDSVFPIQRLRMFYPEELECVFCGSGSEQQHSRWEIKMLQESCRTDHGFHQDSQAIQYLYE 3049
            .|:||:||||:..|:.||||||:.:.|||.::.    |::|.|.|.||.|||:..||:|:::|:|
 Frog  1905 FRDGFESVFPLNHLQYFYPEELDQLLCGSRADP----WDVKTLMECCRPDHGYTHDSRAVKFLFE 1965

  Fly  3050 ILASYNRDEQRAFLQFVTGSPRLPTGGFKALTPPLTIVRKTLDENQNPNDYLPSVMTCVNYLKLP 3114
            ||:|:::::||.||||||||||||.|||::|.|||||||||.:..:||:|:||||||||||||||
 Frog  1966 ILSSFDKEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFEATENPDDFLPSVMTCVNYLKLP 2030

  Fly  3115 DYSSREVMRQKLKVAANEGSMSFHLS 3140
            ||||.:.||:||.:||.||..|||||
 Frog  2031 DYSSIDNMREKLLMAAREGQQSFHLS 2056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669 12/42 (29%)
WWE 1409..1481 CDD:128922 49/71 (69%)
FAM199X <1985..2074 CDD:292442 25/88 (28%)
HECTc <2818..3138 CDD:294058 168/319 (53%)
trip12NP_001136384.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..440 113/629 (18%)
PHA03307 84..>462 CDD:223039 115/539 (21%)
SRP1 483..>708 CDD:227396 164/224 (73%)
WWE 805..866 CDD:397111 46/60 (77%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1027..1147 49/285 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1465..1500 10/77 (13%)
K-box. /evidence=ECO:0000250 1560..1634 51/73 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1632..1651 9/18 (50%)
HECTc 1654..2054 CDD:238033 220/535 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 562 1.000 Domainoid score I237
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1131 1.000 Inparanoid score I223
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D10145at33208
OrthoFinder 1 1.000 - - FOG0004709
OrthoInspector 1 1.000 - - oto105136
Panther 1 1.100 - - LDO PTHR45670
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3704
SonicParanoid 1 1.000 - - X3310
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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