DRSC/TRiP Functional Genomics Resources

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Protein Alignment ctrip and hectd1

DIOPT Version :9

Sequence 1:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster
Sequence 2:XP_009291386.1 Gene:hectd1 / 100002034 ZFINID:ZDB-GENE-030616-153 Length:2585 Species:Danio rerio


Alignment Length:2868 Identity:548/2868 - (19%)
Similarity:891/2868 - (31%) Gaps:1111/2868 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1089 LQGLQSHDESQQLQAAIEMCQMLVMGN--EDTLAGFPIKQVVPALIQLLRMEHNFD-IMNNACRA 1150
            ||..|..:...||.|..::|.:|:|.:  :......|.:..:|||.::...|...| ::....||
Zfish    13 LQMGQGDERDMQLIALEQLCMLLLMSDNVDRCFETCPPRTFLPALCKIFLDESAPDNVLEVTARA 77

  Fly  1151 LAYMLEALPRSSGTVV---EAVPVFLEKLQVIQ-----CMDVAEQSLSALEILSRRHNKAILQAN 1207
            :.|.|:.....:..:|   .|:.....:|.|::     ..|:|||.:..||::..|.:.|:.:|.
Zfish    78 ITYYLDVSAECTRRIVGVDGAIKALCNRLVVVELNNRTSRDLAEQCVKVLELICTRESGAVFEAG 142

  Fly  1208 GISACLTYL-DFFSIVAQ---RAALAIAANCCLNMHPEE--FHFVAESLPLLARLLSQQDKKCIE 1266
            |::..|::: |...:|.:   .:|:|:.:..|..|.|::  .....||   |:.||..:|.:..:
Zfish   143 GLNCVLSFIRDSGHLVHKDTLHSAMAVVSRLCSKMEPQDSSLETCVES---LSSLLKHEDHQVSD 204

  Fly  1267 SVCSAFCRLVESFQHDGQRLQQIASPDLLKNCQQLLLVT------------PAILNTGT------ 1313
            .....|..|.:.|...|.....:|...|.:.....:...            |...::|.      
Zfish   205 GALRCFASLADRFTRRGVDPAPLAKHGLTEELLSRMAAAGGTASGPSSTCKPGRTSSGAAPSAAD 269

  Fly  1314 ------FTAVVRMLSLMCCSCPDLAISLLRNDIAATLLYLLTGNAEPAAASATHVELISRSPSEL 1372
                  .:.:|.:||.:|...|.:...|||:::..::...|.|:......:...|:|        
Zfish   270 SKLSNQVSTIVSLLSTLCRGSPLVTHDLLRSELPDSMESALQGDERCVLDTMRLVDL-------- 326

  Fly  1373 YELTCLIGELMPRLP---------LDGIFAVDSLLDRPTLNTQDQVHWQWRDDRGSWHNYSTIDS 1428
              |..|:.|....||         :.|:..:||        :.::.|.|..|...|....:.||:
Zfish   327 --LLVLLFEGRKALPKSTAGSTGRIPGLRRLDS--------SGERSHRQLIDCIRSKDTDALIDA 381

  Fly  1429 RLIEAANQSSEDEIS------LSTFGRTYTVDFHAMQQINEDTGTTRPVQRRLNHNYVA----PM 1483
            ....|...:..|::.      .|.||....|:|...:..:.:.|     ||..:.:|.|    |.
Zfish   382 IDTGAFEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNRG-----QRSSSLHYAACFGRPQ 441

  Fly  1484 --------SAGQDLT----TTSAGSAAAGGASTSAAAAAASSNNNNNNNNNPPGN---SVNLNQV 1533
                    .|..||.    .|....|...|.|...|...:            ||:   .||....
Zfish   442 VAKTLLRHGANPDLRDEDGKTPLDKARERGHSEVVAILQS------------PGDWMCPVNKGDD 494

  Fly  1534 KRRPSLDARIACLKEERG--------LAADFIKHIFNVLYEVYSSSAGPNVRYKCLRALLRMVYY 1590
            |::..::.     :||.|        :|..::|.:..|..:.:..:..|::|...|..:.:||:|
Zfish   495 KKKKDVNK-----EEEEGSEPKGDPEMAPIYLKRLLPVFAQTFQQTMLPSIRKASLALIRKMVHY 554

  Fly  1591 ATPELLRQVLKYQL----------VSSHIAGMLGSNDLRIVVGALQMAEILMRQLPDVFGTHFRR 1645
            ::..||::|.....          :::.:......:|..::  |||:...|:.:..|||.....|
Zfish   555 SSEVLLKEVCDSDAGHNLPTVLVEITATVLDQEDDDDGHLL--ALQIIRDLVDKGGDVFLDQLAR 617

  Fly  1646 EGVIYQFTQLTDPNN-------------------------------------------------- 1660
            .|||.:.:.|..|.:                                                  
Zfish   618 LGVINKVSTLAGPTSDDENEEEAKPEKDDEPQEDAKEIQQGKPYHWRDWSIIRGRDCLYIWSDAA 682

  Fly  1661 ------------------------------------------------------PICANPSPKPL 1671
                                                                  |:.|:   :|:
Zfish   683 ALELSNGSNGWFRFILDGKLATMYSSGSPEGGSDSSESRSEFLEKLQRARSQVKPVTAS---QPI 744

  Fly  1672 SATATPTA-------------------NAGGSQS------------------------------- 1686
            .:|..||.                   |:.|.|:                               
Zfish   745 LSTQGPTKLTVGNWSLTCLKEGEIAIHNSDGQQATILKEDLPGFVFESNRGTKHSFTAETSLGSE 809

  Fly  1687 ----------------------------------------------------------------- 1686
                                                                             
Zfish   810 FVTGWTGKRGRKLKSKLEKTKQKVKTMARDLYDDHFKAVESMPRGVVVTLRNIATQLESAWELHT 874

  Fly  1687 ----------------------------------------------------------------- 1686
                                                                             
Zfish   875 NRQCIEGENTWRDLMKTALENLIVVLKDENTISPYEMCSSGLVQALFTVLSNSVELDIKHDCKPL 939

  Fly  1687 ---------------------------------------------APASANSLQVNP----FFMD 1702
                                                         .|.|..:||:..    |.::
Zfish   940 MERINVFKTAFTENEDDESRPAVALIRKLIAVLESIERLPLHLYDTPGSTYNLQILTRRLRFRLE 1004

  Fly  1703 SAPG-------------LSSASTTPSSSKH-------QSYSVK----------------SFSH-- 1729
            .|||             :...:|..|..::       |.|...                :|.|  
Zfish  1005 RAPGETALIDRTGRMLKMEPLATVESLEQYLLKMVAKQWYDFDRSSFIFVRKLREGQNFTFRHQH 1069

  Fly  1730 -----------AMNALTASAKGTPS--GALDATSSSTTAGGYNYSSSAPSSSSGA---------- 1771
                       ..||.||.....|:  |.:..|||......|.......|..|.|          
Zfish  1070 DFDENGIVYWIGTNAKTAYEWVNPAAYGLVVVTSSEGRNLPYGRLEDILSRDSSALNCHTNDDKN 1134

  Fly  1772 ------------PAAY---------------FVTQQGDPRQ-----YVHFQQPAV--PAPPPQQE 1802
                        |:||               :|.|.....|     |.|....::  |.......
Zfish  1135 AWFAIDLGLWFVPSAYTLRHARGYGRSALRNWVFQVSKDGQNWMTLYTHVDDSSLNEPGSTATWP 1199

  Fly  1803 LLPSGVQQQG-------QQVPQVIYQPHHQQPAHLVLASTSSGAASSSSSSSSSSSASALQHK-- 1858
            |.||..::||       |.......|.|:...:.|.:..|.:|........:...:.:.|:.:  
Zfish  1200 LDPSKDEKQGWRHIRIKQMGKNASGQTHYLSLSGLEIYGTVTGVCEDQLGKAVKEAEANLRRQRR 1264

  Fly  1859 --MTDMLKRKAPPKR---------KSQSGGRA-----------------------------KSRQ 1883
              .:.::|...|..|         :.|.|..|                             ...:
Zfish  1265 LFRSQVMKYIVPGARVVRGIDWKWRDQDGNPAGEGTVTGEAHNGWIDVTWDAGGSNSYRMGAEGK 1329

  Fly  1884 EDAAVAPAGSGPGGAP-PSSSGSAMHELLSRATSLGSGNGGRSTPNSGGGS----GSSKSRFNAG 1943
            .|..:|| |..|..|| |....|.:.......:||...|    .|:.||.|    .||.||  .|
Zfish  1330 FDLKLAP-GYDPESAPSPKPVSSTVAGTPQSWSSLVKNN----CPDKGGSSSTAGASSSSR--KG 1387

  Fly  1944 NSSNAGSSKSSFLASLNPARWGRQTHQNHHHHHQQSQQQHHGLSKDSGNSNSTG-------SGSG 2001
            :||:..|..||...||:..|..|:.....          ..|:....|...:.|       |.:.
Zfish  1388 SSSSVCSVASSSDISLSSTRVERRVESLF----------EQGVGVIGGPPGAEGQEPIVVLSSAE 1442

  Fly  2002 AGLAYTVSQHGAGSGA---------GGLNAAAVAASISKSI------------------------ 2033
            ||.|.:.|...|.:|:         .|...:|.:.:||..|                        
Zfish  1443 AGSASSTSTLTADTGSESERKTPGPDGTRQSAESTAISMGIVSVSSPDVSSVSESSSKDAASQRP 1507

  Fly  2034 ---------SHANLLAAANRERARQWV-----REQAV--DFVKRYTEQEAKRSKAASESGATQSG 2082
                     |.::||||.....:...|     ||.::  .||:|  .....|:.|.:....::|.
Zfish  1508 LCSATSARLSVSSLLAAGAPMSSSASVPNLSSREASLMESFVRR--APNMSRTNATNNMNLSRSS 1570

  Fly  2083 SS------GVGLSSTGNTP---------LSTAGSTNVLERLSSILFKLNG--------SYHDCLD 2124
            |.      |..:.||..:|         |:|.|:|:.:...:||:...|.        |....|.
Zfish  1571 SDNNTNTLGRNVMSTATSPLMGAQSFPNLTTTGTTSTVTMSTSIVTSSNNVATATTGLSVGQLLS 1635

  Fly  2125 ALL--ELKTILLESD------ISPFEVNHSGLIKAMLNYMTSETGLVERD--------------- 2166
            ..|  .|.:...|||      .|.::...|.....:|..:..|..|.|.|               
Zfish  1636 NTLTTSLTSTSSESDTGQEAEFSLYDFLDSCRANTLLAELDDEEDLPEPDDDDDENEDDNQEEQE 1700

  Fly  2167 -------ARLRSFMHVFAGLPLEPLLQNVGQMPTIEPIAFGAFVAKLNGCVTQLEQFPVKVHDFP 2224
                   :|:....||......|......|:..|.:    ..||.|        .||...|..|.
Zfish  1701 YEEVLVRSRVNLGYHVHIHREEEEYETKGGRRRTWD----DDFVLK--------RQFSALVPAFD 1753

  Fly  2225 AGPGGRSNQSALRFFNTHQLKCNLQRHPQCNNLRQWKGGTVKIDPLAMVQA-----IERYLVVRG 2284
            ..||                :.|:|   |..:|.....||.:.:....|:.     :...|.|.|
Zfish  1754 PRPG----------------RTNVQ---QTTDLEIPPPGTPRSEVQEEVECAPSPRLALILKVAG 1799

  Fly  2285 YGGIRADSDDDSEEDMDDNVAAVVLSQASFRHK--------LQFTIGDHVLPYNM-TVYQAVKQF 2340
            .|..|                .|.|...:::..        ||.:....:.|..: .:::..  :
Zfish  1800 LGTTR----------------EVELPLTNYKSTIFYYVQKLLQLSCNGAIKPDKLRRIWEPT--Y 1846

  Fly  2341 SPLVSEQPETDNESETLLGNASIWVQQHTIHYRPVEEEVTSGAAAGAASSSSSCSSGVQKQQSSS 2405
            :.:..|..::|.|.|:  |....|..:|...|...:|           ...:...:.:||...|:
Zfish  1847 TIMYRELKDSDKERES--GKMGCWSVEHVEQYLGTDE-----------LPKNDLITYMQKNADST 1898

  Fly  2406 -------SSASSCVNATSSCSS--------------SSGVASGGGSLTKKAHKSSSKFMRKKTEL 2449
                   :.::..:....:||.              |||::||..|.|:...             
Zfish  1899 FLRHWKLTGSNKSIRKNRNCSQLIAAYKDFCERGCRSSGLSSGTLSTTQSCD------------- 1950

  Fly  2450 WHEGIAPVVISALKPFLSSSLPADVVTVQDASL--DALCMLRVIHALNRHWDHLYGCVVRQ---- 2508
                    ::||.:    ....|...:.|.|..  |.|.:||::..:.  .:...|..:::    
Zfish  1951 --------ILSAAR----EQAQAKAGSGQSACSVEDVLQLLRILFTIG--GEPTSGRTLQEDVEE 2001

  Fly  2509 ---NIIPQSDFIHPKIMAKANRQLQDPLVIMTGNLPQWLPQIGMACPFLFPFETRHLLFYATSFD 2570
               |..|: :|...||..|..:|:::||.:.:|.||.|..|:...||||.|||||.|.|..|:|.
Zfish  2002 LQFNASPE-EFTSKKITTKILQQIEEPLALASGALPDWCEQLTSKCPFLIPFETRQLYFTCTAFG 2065

  Fly  2571 RDRA---LQRLLDTTPDLNAAESSER-------VAPRLDRRKRAISRTE-ILKQAEHILQDFGHS 2624
            ..||   ||...:.|.:.:...::.|       ...||...:..:.|.| :::.||.::|.....
Zfish  2066 ASRAIVWLQNRREATMERSRPSTTVRRDDPGEFRVGRLKHERVKVPRGESMMEWAESVMQIHADR 2130

  Fly  2625 KALLEIQYENEVGTGLGPTLEFYALVSAELQRTDLGLWNGSDSYKQNSVTIVDVVKANSAVLHIE 2689
            |::||::::.|.||||||||||||||:||.|||.||:|...|.:..:....||:           
Zfish  2131 KSVLEVEFQGEEGTGLGPTLEFYALVAAEFQRTSLGIWLCDDDFPDDESRQVDL----------- 2184

  Fly  2690 DALEATTTDQNTPAVAGASLVSSSTTTTTTTAQQHQHPPTRSSSRSHVLRSGAGQQPVEHSSSSA 2754
                                                               |.|.:|..:     
Zfish  2185 ---------------------------------------------------GGGLKPPGY----- 2193

  Fly  2755 GANENALNMVIAQQFSDTNSANPAAIDNPSSTTTATTVVQHNTTTNNSSIITTTTTTSYVHAVHG 2819
                                                                      ||....|
Zfish  2194 ----------------------------------------------------------YVQRSCG 2200

  Fly  2820 LFPLPLGK-SSKLPQMTKAKAKFKFLGKFMAKAVMDSRMLDLPFSLPFYRWLV------------ 2871
            |||.|..: |.:|.::||.   |.|||.|:||.:.|:|::|||.|.||::.|.            
Zfish  2201 LFPAPFPQDSDELERITKL---FLFLGIFLAKCIQDNRLVDLPISQPFFKLLCMGDIKSNMSKLL 2262

  Fly  2872 -------------------SEE----HSIG----------------------------LADLMRV 2885
                               :||    :|:|                            ..|...|
Zfish  2263 YQTRGESDCHFSEIQSEASTEEGQDTYSVGSFDEDSKSEFILDPPKPKPPAWYHGILTWEDFELV 2327

  Fly  2886 APEVQNTLVRLQDLVRQREYILSDPNIDAMEKTEKIEQLDL-----DGCP--IADLGLDF----- 2938
            .|.....|..|:.|..:|..||.:.::...||..:::.|.|     .|.|  :.||||:|     
Zfish  2328 NPHRALFLKELKALSVKRRQILGNKSLSEDEKNTRLQDLMLKNPMGSGPPLCVEDLGLNFQFCPS 2392

  Fly  2939 -VLPGHANIELCRGGRDTPVTVHNLHQYISLVTYWFLIEGVQKQFEALREGFDSVFPIQRLRMFY 3002
             .:.|.::::|...|.|..||:.|..:|:.|:..:.:..|:|||.||.||||:.|||:::|..|.
Zfish  2393 SKVHGFSSVDLKPNGEDEMVTMDNAEEYVELMFDFCMHTGIQKQMEAFREGFNKVFPMEKLSSFS 2457

  Fly  3003 PEELECVFCGSGSEQQHSRWEIKMLQESCRTDHGFHQDSQAIQYLYEILASYNRDEQRAFLQFVT 3067
            .:|::.:.||:    |...|..:.:........|:.:||........:|...:.||::|||||.|
Zfish  2458 HKEVQMILCGN----QSPSWTAEDIVNYTEPKLGYTRDSPGFLRFVRVLCGMSSDERKAFLQFTT 2518

  Fly  3068 GSPRLPTGGFKALTPPLTIVRKTLDENQNPNDYLPSVMTCVNYLKLPDYSSREVMRQKLKVAANE 3132
            |...||.||...|.|.||||||.   :.....| |||.|||:|||||:|||.|:||::|..|..|
Zfish  2519 GCSTLPPGGLANLHPRLTIVRKV---DATDASY-PSVNTCVHYLKLPEYSSEEIMRERLLAATME 2579

  Fly  3133 GSMSFHLS 3140
              ..|||:
Zfish  2580 --KGFHLN 2585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669
WWE 1409..1481 CDD:128922 17/77 (22%)
FAM199X <1985..2074 CDD:292442 28/144 (19%)
HECTc <2818..3138 CDD:294058 124/396 (31%)
hectd1XP_009291386.1 Ank_2 366..457 CDD:289560 20/95 (21%)
ANK repeat 366..393 CDD:293786 5/26 (19%)
ANK 369..479 CDD:238125 24/114 (21%)
ANK repeat 396..426 CDD:293786 6/34 (18%)
ANK repeat 428..457 CDD:293786 6/28 (21%)
F5_F8_type_C 1107..1240 CDD:304887 22/132 (17%)
MIB_HERC2 1277..1335 CDD:284184 5/57 (9%)
HECTc 2106..2583 CDD:238033 163/614 (27%)
HECTc 2130..2582 CDD:214523 158/589 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D10145at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3704
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.950

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