DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14655 and CMR3

DIOPT Version :9

Sequence 1:NP_649494.1 Gene:CG14655 / 40594 FlyBaseID:FBgn0037275 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_015338.1 Gene:CMR3 / 856123 SGDID:S000006217 Length:317 Species:Saccharomyces cerevisiae


Alignment Length:354 Identity:76/354 - (21%)
Similarity:119/354 - (33%) Gaps:126/354 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 FANCKELFLGLDKLTIHLFSHTSLMAQEGNESPANGQPASSRGFLAAAPPKRRAKRTRSKPVVP- 101
            :.|.:|.:   :...|:|...:||:....|.:|.|   ..||   ...||::..:.....|:|. 
Yeast    60 YKNERECY---NSTKINLPPISSLLPNFENNTPPN---VDSR---VQFPPQQVYQSMNVVPIVNE 115

  Fly   102 --TPPPVRTTPPAHCDICEFSFRNTELRDMHVRLVHENAEGEPKQKEPQQKEPDQEPYKCHLCSK 164
              ||..:..|..      ::....|                |.:|..|..:.|       ||.|.
Yeast   116 IYTPISMNATSD------QYPIYYT----------------ESQQPIPHSQSP-------HLTSS 151

  Fly   165 TFRMKGSLRIHLKVVHMMGVPCSNPNPNP-----NPSPTPASTTSAVTATPKLSIC-DRIRHTEP 223
            ...|   :.:.:..|:.   |.:..:..|     .|:.|..|..|...|.  |.:| ||.:...|
Yeast   152 APLM---MPVMVPTVYK---PLTPYDKEPITIASEPNFTAISMASHPNAA--LELCHDRPKSVPP 208

  Fly   224 GALGNGNNSTCTASQPYALSGALSMLQQS--------PSSPESGTATPKLWECDVCSKSFTTKYF 280
            |                  .|.|..:|::        |.:..:|:||...|:.|  ::..:||  
Yeast   209 G------------------YGVLPTMQEASNGRTKSEPGAVLNGSATFSDWKTD--TRISSTK-- 251

  Fly   281 LKKHKRLHTGEMPYTCEICARTFTFQQSYHKHLLYHSEVKPHVCGVCGRAFKELSTLHNHQRIHS 345
            |:|.                                       |.|||:.....|||..|..||:
Yeast   252 LRKQ---------------------------------------CPVCGKICSRPSTLKTHYLIHT 277

  Fly   346 GEKPFKC--EVCGKCFRQRVSFLVHTRIH 372
            |:.||||  |.|.|.|..:.:.|.|.:.|
Yeast   278 GDTPFKCTWEGCTKSFNVKSNMLRHLKSH 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14655NP_649494.1 C2H2 Zn finger 268..288 CDD:275368 5/19 (26%)
zf-H2C2_2 281..304 CDD:290200 2/22 (9%)
C2H2 Zn finger 324..344 CDD:275368 8/19 (42%)
zf-H2C2_2 339..361 CDD:290200 12/23 (52%)
C2H2 Zn finger 352..372 CDD:275368 7/21 (33%)
zf-H2C2_2 364..389 CDD:290200 3/9 (33%)
C2H2 Zn finger 380..396 CDD:275368
CMR3NP_015338.1 COG5048 17..316 CDD:227381 76/354 (21%)
C2H2 Zn finger 256..276 CDD:275370 8/19 (42%)
C2H2 Zn finger 284..306 CDD:275370 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 54 1.000 Inparanoid score I1809
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.