DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14655 and CG3407

DIOPT Version :9

Sequence 1:NP_649494.1 Gene:CG14655 / 40594 FlyBaseID:FBgn0037275 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_608809.1 Gene:CG3407 / 33606 FlyBaseID:FBgn0031573 Length:714 Species:Drosophila melanogaster


Alignment Length:506 Identity:117/506 - (23%)
Similarity:197/506 - (38%) Gaps:143/506 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DALQQRLIKAANGPLACP------FANCKELFLGL----DKLTIH-------------------L 55
            |.|...::..::.|.:.|      |::.:::..|:    ||::|.                   .
  Fly   270 DKLNAVVVNTSSTPNSVPVVDDVEFSDTEDMLEGIRNVVDKVSIEDTCDELVDLELTSSGMTAPW 334

  Fly    56 FSHT------SLMAQEGNESPANGQPAS-------------SRGFLA--AAPPKRRAK--RTRSK 97
            |::.      ..:...|...||:.:||:             :..||:  .|.|:..||  :|.||
  Fly   335 FNNNFRDITFPALLLPGEPPPASSEPATPLLKENPHVGDHMALDFLSPEKADPQEEAKLEKTLSK 399

  Fly    98 PVVPT------------PPPVRTTPPAHCDICEFSFRNTELRDMHVRLVHENAEGEPKQKEPQQK 150
            ...|.            .||:.|.|||:..|.:......||.:. .:|..::..........::.
  Fly   400 ACEPNEQTLLVAPPACQTPPIPTVPPANSSIEQLRRSPLELSEA-FKLEEDDMTDSRPASSFEEG 463

  Fly   151 EPD-QEPYKCHLCSKTFRMK---GSLRIHLKVVHMMGVPCSNPNPNPNPSPTPASTTSAVTATPK 211
            :|| :||.:|      |:|:   .||                             |..|...|.:
  Fly   464 DPDAEEPNEC------FQMEVLDTSL-----------------------------TEEAENKTRR 493

  Fly   212 LSICDRIRHTEPGALGNGNNSTCTASQPYALSGALSMLQQSPSSPESGTATPKLWECDVCSKSFT 276
            ...||:                  .::.:....||...|.:.:...|       .:||.|.:||.
  Fly   494 KHFCDK------------------CNRDFNSYNALKYHQYTHNQERS-------HKCDSCERSFY 533

  Fly   277 TKYFLKKHKRLHTGEMPYTCEICARTFTFQQ----SYHKHLLYHSEVKPHVCGVCGRAFKELSTL 337
            |:..||.|:|.|:|..|:.|:.|  .|.|:|    .|| .:..||:||.|:|..||::|....:|
  Fly   534 TQSALKAHERTHSGVKPFKCDKC--EFQFRQWGDLKYH-IISRHSDVKAHMCEFCGKSFSRRYSL 595

  Fly   338 HNHQRIHSGEKPFKCEVCGKCFRQRVSFLVHTRIHTGVMPYKCELCQKTFRYKVSQRTH---RCP 399
            ..|:|||:.||.:.|:.|.|.||.....|.|.::|||..||:|.:|:|.||.....:.|   ..|
  Fly   596 VVHRRIHTREKNYACQYCDKTFRASSYLLSHIKVHTGERPYECSICEKKFRVSGDLKRHSRIHDP 660

  Fly   400 TEEAQTPEQLIKAFLEGNDSHTQPSPASAEIAAINSSSIVDPEQEALLSQS 450
            :..:|.|.:..|.......:...|.....|:|    ::|.:.:.:|:..|:
  Fly   661 SRTSQPPAEKAKKKRAAASNKQLPIEEDDELA----TNIQNNKSDAMRDQT 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14655NP_649494.1 C2H2 Zn finger 268..288 CDD:275368 10/19 (53%)
zf-H2C2_2 281..304 CDD:290200 9/22 (41%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
zf-H2C2_2 339..361 CDD:290200 10/21 (48%)
C2H2 Zn finger 352..372 CDD:275368 7/19 (37%)
zf-H2C2_2 364..389 CDD:290200 11/24 (46%)
C2H2 Zn finger 380..396 CDD:275368 5/15 (33%)
CG3407NP_608809.1 COG5048 <494..656 CDD:227381 60/189 (32%)
C2H2 Zn finger 497..517 CDD:275368 5/37 (14%)
zf-H2C2_2 509..534 CDD:290200 9/31 (29%)
C2H2 Zn finger 525..545 CDD:275368 10/19 (53%)
zf-H2C2_2 537..562 CDD:290200 11/26 (42%)
C2H2 Zn finger 555..574 CDD:275371 6/21 (29%)
zf-C2H2 580..602 CDD:278523 8/21 (38%)
C2H2 Zn finger 582..602 CDD:275368 7/19 (37%)
zf-H2C2_2 594..617 CDD:290200 10/22 (45%)
C2H2 Zn finger 610..630 CDD:275368 7/19 (37%)
zf-H2C2_2 622..645 CDD:290200 10/22 (45%)
zf-C2H2 636..658 CDD:278523 7/21 (33%)
C2H2 Zn finger 638..658 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.