DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14655 and gfi1b

DIOPT Version :10

Sequence 1:NP_649494.1 Gene:CG14655 / 40594 FlyBaseID:FBgn0037275 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_002936223.1 Gene:gfi1b / 100489910 XenbaseID:XB-GENE-944426 Length:343 Species:Xenopus tropicalis


Alignment Length:409 Identity:93/409 - (22%)
Similarity:138/409 - (33%) Gaps:156/409 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LGLDKLTIHLFSHTS-------LMAQEGNE---SPANG-------QPASSR-------------G 80
            :|||.|....::|.:       ..:.:.|:   :|.|.       .|..||             .
 Frog    27 VGLDLLATSYYAHCAEFPVEPPAFSTDRNDKVHTPENTTTEETDIDPGDSREKIPFISRSISPNA 91

  Fly    81 FLAAAPPKRRAKRTRSKPVVPTPPPVRTTPPAHCDICEFSFRNTELRDMHVRLVHENAEGEPKQK 145
            |...|....|.    |||..|:|            :..|..:|.....:|.....:..   |.|.
 Frog    92 FQGIALSSMRP----SKPYDPSP------------LSAFYAQNFSWETLHSTYGFKQI---PSQI 137

  Fly   146 EPQQKE---------------------------PDQEPYKCHLCSKTFRMKGSLRIHLKVVHMMG 183
            .|...:                           |..:.|.|..|||.|.....|.:|::..|   
 Frog   138 HPSMLQNSINLYSCPPTLDSDSDHPINYSMSYSPKMDSYHCVKCSKVFSTSHGLEVHVRRSH--- 199

  Fly   184 VPCSNPNPNPNPSPTPASTTSAVTATPKLSICDRIRHTEPGALGNGNNSTCTASQPYALSGALSM 248
                                                                             
 Frog   200 ----------------------------------------------------------------- 199

  Fly   249 LQQSPSSPESGTATPKLWECDVCSKSFTTKYFLKKHKRLHTGEMPYTCEICARTFTFQQSYHKHL 313
                     |||   :.:.|::|.|||.....|::|..:|:.|..:.|::|.:||....:...||
 Frog   200 ---------SGT---RPFVCNICGKSFGHAVSLEQHLNVHSQERSFECKMCGKTFKRSSTLSTHL 252

  Fly   314 LYHSEVKPHVCGVCGRAFKELSTLHNHQRIHSGEKPFKCEVCGKCFRQRVSFLVHTRIHTGVMPY 378
            |.||:.:|:.|..||:.|.:.|.:..|..||:||||.||:||||.|.|..:.:.|:|.|||..|:
 Frog   253 LIHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPF 317

  Fly   379 KCELCQKTFRYKVSQRTHR 397
            .|:||.|.|:.||..|.||
 Frog   318 SCDLCGKGFQRKVDLRRHR 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14655NP_649494.1 SUF4-like <157..>180 CDD:411020 8/22 (36%)
C2H2 Zn finger 159..180 CDD:411020 7/20 (35%)
SFP1 <264..345 CDD:227516 26/80 (33%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
zf-H2C2_2 340..361 CDD:463886 14/20 (70%)
C2H2 Zn finger 352..372 CDD:275368 9/19 (47%)
zf-H2C2_2 368..389 CDD:463886 11/20 (55%)
C2H2 Zn finger 380..396 CDD:275368 8/15 (53%)
gfi1bXP_002936223.1 COG5048 <76..337 CDD:227381 84/360 (23%)
C2H2 Zn finger 178..199 CDD:275368 7/20 (35%)
PHA00733 <204..252 CDD:177301 13/47 (28%)
C2H2 Zn finger 207..227 CDD:275368 7/19 (37%)
C2H2 Zn finger 235..255 CDD:275368 7/19 (37%)
C2H2 Zn finger 263..283 CDD:275368 6/19 (32%)
zf-H2C2_2 275..300 CDD:463886 14/24 (58%)
C2H2 Zn finger 291..311 CDD:275368 9/19 (47%)
C2H2 Zn finger 319..336 CDD:275368 8/16 (50%)

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